Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1351 and DVU1352 are separated by 129 nucleotides DVU1352 and dnaE are separated by 1 nucleotides dnaE and DVU1355 are separated by 477 nucleotides DVU1355 and DVU1356 are separated by 7 nucleotides
DVU1351: DVU1351 - membrane protein, MarC family (TIGR), at 1,429,780 to 1,430,382
DVU1351
DVU1352: DVU1352 - 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR), at 1,430,512 to 1,430,901
DVU1352
DVU1353: dnaE - DNA polymerase III, alpha subunit (TIGR), at 1,430,903 to 1,434,397
dnaE
DVU1355: DVU1355 - hypothetical protein (TIGR), at 1,434,875 to 1,435,243
DVU1355
DVU1356: DVU1356 - HD domain protein (TIGR), at 1,435,251 to 1,436,054
DVU1356
Position (kb)
1430
1431
1432
1433
1434
1435 Strain fitness (log2 ratio)
-2
-1
0
1 at 1429.982 kb on - strand, within DVU1351 at 1429.998 kb on + strand, within DVU1351 at 1430.020 kb on + strand, within DVU1351 at 1430.379 kb on + strand at 1430.419 kb on - strand at 1434.464 kb on + strand at 1434.472 kb on - strand at 1434.472 kb on - strand at 1434.484 kb on + strand at 1434.484 kb on + strand at 1434.739 kb on + strand at 1434.739 kb on + strand at 1434.739 kb on + strand at 1434.747 kb on - strand at 1434.754 kb on + strand at 1434.754 kb on + strand at 1434.754 kb on + strand at 1434.762 kb on - strand at 1434.762 kb on - strand at 1434.773 kb on + strand at 1434.781 kb on - strand at 1434.956 kb on + strand, within DVU1355 at 1434.992 kb on + strand, within DVU1355 at 1435.023 kb on - strand, within DVU1355 at 1435.093 kb on - strand, within DVU1355 at 1435.167 kb on - strand, within DVU1355 at 1435.206 kb on - strand, within DVU1355 at 1435.211 kb on - strand at 1435.211 kb on - strand at 1435.265 kb on - strand at 1435.335 kb on + strand, within DVU1356 at 1435.352 kb on + strand, within DVU1356 at 1435.352 kb on + strand, within DVU1356 at 1435.360 kb on - strand, within DVU1356 at 1435.360 kb on - strand, within DVU1356
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,429,982 - DVU1351 0.33 -1.5 1,429,998 + DVU1351 0.36 -0.2 1,430,020 + DVU1351 0.40 +0.5 1,430,379 + -1.6 1,430,419 - +0.2 1,434,464 + -0.5 1,434,472 - +0.5 1,434,472 - -0.5 1,434,484 + -0.6 1,434,484 + -2.4 1,434,739 + +0.4 1,434,739 + -1.0 1,434,739 + -0.5 1,434,747 - -0.1 1,434,754 + +0.3 1,434,754 + -0.6 1,434,754 + +0.1 1,434,762 - +0.1 1,434,762 - -0.3 1,434,773 + -0.5 1,434,781 - -0.5 1,434,956 + DVU1355 0.22 -0.2 1,434,992 + DVU1355 0.32 -0.2 1,435,023 - DVU1355 0.40 -0.5 1,435,093 - DVU1355 0.59 -0.2 1,435,167 - DVU1355 0.79 +1.0 1,435,206 - DVU1355 0.90 -0.5 1,435,211 - -1.2 1,435,211 - -0.1 1,435,265 - -1.0 1,435,335 + DVU1356 0.10 +0.9 1,435,352 + DVU1356 0.13 +0.0 1,435,352 + DVU1356 0.13 -0.5 1,435,360 - DVU1356 0.14 +0.8 1,435,360 - DVU1356 0.14 +0.2
Or see this region's nucleotide sequence