Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0062 and DVUA0063 are separated by 56 nucleotides DVUA0063 and DVUA0063.1 overlap by 4 nucleotides
DVUA0062: DVUA0062 - conserved domain protein (TIGR), at 77,184 to 78,479
DVUA0062
DVUA0063: DVUA0063 - Orn/DAP/Arg family decarboxylase (TIGR), at 78,536 to 80,092
DVUA0063
DVUA0063.1: DVUA0063.1 - SEED: FIG00604587: hypothetical protein, at 80,089 to 81,096
DVUA0063.1
Position (kb) 78
79
80
81 Strain fitness (log2 ratio) -2
-1
0
1
2 at 77.576 kb on + strand, within DVUA0062 at 77.576 kb on + strand, within DVUA0062 at 77.639 kb on + strand, within DVUA0062 at 77.752 kb on - strand, within DVUA0062 at 77.772 kb on + strand, within DVUA0062 at 77.813 kb on - strand, within DVUA0062 at 77.850 kb on - strand, within DVUA0062 at 77.884 kb on - strand, within DVUA0062 at 77.922 kb on + strand, within DVUA0062 at 78.033 kb on + strand, within DVUA0062 at 78.092 kb on - strand, within DVUA0062 at 78.097 kb on - strand, within DVUA0062 at 78.236 kb on + strand, within DVUA0062 at 78.241 kb on - strand, within DVUA0062 at 78.261 kb on - strand, within DVUA0062 at 78.311 kb on + strand, within DVUA0062 at 78.547 kb on - strand at 78.633 kb on + strand at 78.794 kb on - strand, within DVUA0063 at 78.808 kb on + strand, within DVUA0063 at 78.828 kb on + strand, within DVUA0063 at 78.848 kb on - strand, within DVUA0063 at 78.848 kb on - strand, within DVUA0063 at 78.865 kb on + strand, within DVUA0063 at 79.093 kb on - strand, within DVUA0063 at 79.138 kb on - strand, within DVUA0063 at 79.160 kb on + strand, within DVUA0063 at 79.289 kb on + strand, within DVUA0063 at 79.318 kb on - strand, within DVUA0063 at 79.324 kb on + strand, within DVUA0063 at 79.449 kb on + strand, within DVUA0063 at 79.449 kb on + strand, within DVUA0063 at 79.454 kb on + strand, within DVUA0063 at 79.498 kb on - strand, within DVUA0063 at 79.535 kb on - strand, within DVUA0063 at 79.570 kb on + strand, within DVUA0063 at 79.578 kb on - strand, within DVUA0063 at 79.619 kb on - strand, within DVUA0063 at 79.639 kb on + strand, within DVUA0063 at 79.655 kb on + strand, within DVUA0063 at 79.661 kb on + strand, within DVUA0063 at 79.667 kb on - strand, within DVUA0063 at 79.670 kb on + strand, within DVUA0063 at 79.678 kb on - strand, within DVUA0063 at 79.772 kb on + strand, within DVUA0063 at 79.902 kb on + strand, within DVUA0063 at 79.940 kb on - strand at 79.966 kb on + strand at 79.975 kb on + strand at 80.000 kb on + strand at 80.044 kb on - strand at 80.067 kb on - strand at 80.085 kb on + strand at 80.096 kb on + strand at 80.106 kb on + strand at 80.225 kb on - strand, within DVUA0063.1 at 80.421 kb on + strand, within DVUA0063.1 at 80.468 kb on - strand, within DVUA0063.1 at 80.477 kb on - strand, within DVUA0063.1 at 80.505 kb on + strand, within DVUA0063.1 at 80.505 kb on + strand, within DVUA0063.1 at 80.513 kb on - strand, within DVUA0063.1 at 80.513 kb on - strand, within DVUA0063.1 at 80.528 kb on + strand, within DVUA0063.1 at 80.559 kb on - strand, within DVUA0063.1 at 80.561 kb on + strand, within DVUA0063.1 at 80.561 kb on + strand, within DVUA0063.1 at 80.561 kb on + strand, within DVUA0063.1 at 80.568 kb on - strand, within DVUA0063.1 at 80.569 kb on - strand, within DVUA0063.1 at 80.569 kb on - strand, within DVUA0063.1 at 80.569 kb on - strand, within DVUA0063.1 at 80.615 kb on - strand, within DVUA0063.1 at 80.936 kb on - strand, within DVUA0063.1 at 80.951 kb on + strand, within DVUA0063.1
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 77,576 + DVUA0062 0.30 -0.0 77,576 + DVUA0062 0.30 +0.1 77,639 + DVUA0062 0.35 +2.1 77,752 - DVUA0062 0.44 +0.1 77,772 + DVUA0062 0.45 +0.1 77,813 - DVUA0062 0.49 -1.7 77,850 - DVUA0062 0.51 -0.7 77,884 - DVUA0062 0.54 +0.1 77,922 + DVUA0062 0.57 -0.4 78,033 + DVUA0062 0.66 -0.2 78,092 - DVUA0062 0.70 -0.1 78,097 - DVUA0062 0.70 +0.4 78,236 + DVUA0062 0.81 -0.0 78,241 - DVUA0062 0.82 -0.0 78,261 - DVUA0062 0.83 +0.3 78,311 + DVUA0062 0.87 +0.8 78,547 - +0.1 78,633 + -0.0 78,794 - DVUA0063 0.17 -1.7 78,808 + DVUA0063 0.17 -0.2 78,828 + DVUA0063 0.19 -0.6 78,848 - DVUA0063 0.20 -1.1 78,848 - DVUA0063 0.20 -0.1 78,865 + DVUA0063 0.21 +0.9 79,093 - DVUA0063 0.36 -0.9 79,138 - DVUA0063 0.39 -1.3 79,160 + DVUA0063 0.40 +0.3 79,289 + DVUA0063 0.48 -0.8 79,318 - DVUA0063 0.50 -0.6 79,324 + DVUA0063 0.51 -0.9 79,449 + DVUA0063 0.59 +0.4 79,449 + DVUA0063 0.59 -2.2 79,454 + DVUA0063 0.59 -0.9 79,498 - DVUA0063 0.62 -0.6 79,535 - DVUA0063 0.64 -1.1 79,570 + DVUA0063 0.66 +0.1 79,578 - DVUA0063 0.67 -0.7 79,619 - DVUA0063 0.70 -1.3 79,639 + DVUA0063 0.71 -0.1 79,655 + DVUA0063 0.72 -1.1 79,661 + DVUA0063 0.72 +1.9 79,667 - DVUA0063 0.73 +0.8 79,670 + DVUA0063 0.73 -0.3 79,678 - DVUA0063 0.73 +0.6 79,772 + DVUA0063 0.79 -0.1 79,902 + DVUA0063 0.88 -0.2 79,940 - -1.8 79,966 + -0.3 79,975 + -0.2 80,000 + -0.7 80,044 - +0.0 80,067 - -0.8 80,085 + -0.8 80,096 + -0.0 80,106 + +0.8 80,225 - DVUA0063.1 0.13 +0.3 80,421 + DVUA0063.1 0.33 +0.6 80,468 - DVUA0063.1 0.38 -0.2 80,477 - DVUA0063.1 0.38 +0.1 80,505 + DVUA0063.1 0.41 -0.0 80,505 + DVUA0063.1 0.41 +0.5 80,513 - DVUA0063.1 0.42 -0.8 80,513 - DVUA0063.1 0.42 -0.9 80,528 + DVUA0063.1 0.44 -1.5 80,559 - DVUA0063.1 0.47 +0.1 80,561 + DVUA0063.1 0.47 -0.6 80,561 + DVUA0063.1 0.47 +1.5 80,561 + DVUA0063.1 0.47 +0.1 80,568 - DVUA0063.1 0.48 +1.3 80,569 - DVUA0063.1 0.48 +1.4 80,569 - DVUA0063.1 0.48 +0.0 80,569 - DVUA0063.1 0.48 +0.2 80,615 - DVUA0063.1 0.52 -0.5 80,936 - DVUA0063.1 0.84 +0.1 80,951 + DVUA0063.1 0.86 -1.6
Or see this region's nucleotide sequence