Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0344 and DVU0346 are separated by 346 nucleotides DVU0346 and DVU0347 are separated by 295 nucleotides DVU0347 and DVU0348 are separated by 18 nucleotides
DVU0344: DVU0344 - methyl-accepting chemotaxis protein (TIGR), at 389,669 to 391,483
DVU0344
DVU0346: DVU0346 - membrane protein, putative (TIGR), at 391,830 to 393,368
DVU0346
DVU0347: DVU0347 - transferase, hexapeptide repeat family (TIGR), at 393,664 to 394,335
DVU0347
DVU0348: DVU0348 - hypothetical protein (TIGR), at 394,354 to 396,078
DVU0348
Position (kb)
391
392
393
394 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 390.847 kb on + strand, within DVU0344 at 390.992 kb on - strand, within DVU0344 at 391.093 kb on - strand, within DVU0344 at 391.120 kb on - strand, within DVU0344 at 391.264 kb on - strand, within DVU0344 at 391.274 kb on + strand, within DVU0344 at 391.291 kb on + strand, within DVU0344 at 391.294 kb on - strand, within DVU0344 at 391.301 kb on - strand, within DVU0344 at 391.301 kb on - strand, within DVU0344 at 391.339 kb on + strand at 391.382 kb on + strand at 391.415 kb on + strand at 391.442 kb on - strand at 391.462 kb on + strand at 391.520 kb on + strand at 391.632 kb on + strand at 391.632 kb on + strand at 391.632 kb on + strand at 391.640 kb on - strand at 391.640 kb on - strand at 391.640 kb on - strand at 391.640 kb on - strand at 391.640 kb on - strand at 391.645 kb on + strand at 391.678 kb on + strand at 391.678 kb on + strand at 391.716 kb on - strand at 391.726 kb on - strand at 391.726 kb on - strand at 391.773 kb on + strand at 391.791 kb on - strand at 391.793 kb on - strand at 391.854 kb on - strand at 393.374 kb on + strand at 393.409 kb on - strand at 393.416 kb on + strand at 393.481 kb on + strand at 393.559 kb on - strand at 393.566 kb on + strand at 393.566 kb on + strand at 393.574 kb on - strand at 393.574 kb on - strand at 393.592 kb on + strand at 393.592 kb on + strand at 393.600 kb on - strand at 393.600 kb on - strand at 393.600 kb on - strand at 393.696 kb on - strand at 393.779 kb on - strand, within DVU0347 at 393.789 kb on - strand, within DVU0347 at 393.792 kb on - strand, within DVU0347 at 393.809 kb on - strand, within DVU0347 at 393.859 kb on + strand, within DVU0347 at 393.867 kb on - strand, within DVU0347 at 393.876 kb on - strand, within DVU0347 at 394.039 kb on - strand, within DVU0347 at 394.118 kb on - strand, within DVU0347 at 394.209 kb on + strand, within DVU0347 at 394.226 kb on - strand, within DVU0347 at 394.281 kb on + strand at 394.309 kb on - strand at 394.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 390,847 + DVU0344 0.65 +0.2 390,992 - DVU0344 0.73 +0.5 391,093 - DVU0344 0.78 -0.2 391,120 - DVU0344 0.80 +0.1 391,264 - DVU0344 0.88 -0.3 391,274 + DVU0344 0.88 -0.6 391,291 + DVU0344 0.89 -2.9 391,294 - DVU0344 0.90 -1.9 391,301 - DVU0344 0.90 +0.1 391,301 - DVU0344 0.90 +0.2 391,339 + -2.4 391,382 + +1.0 391,415 + -0.9 391,442 - -1.3 391,462 + -0.1 391,520 + +0.9 391,632 + -0.2 391,632 + +0.9 391,632 + -0.8 391,640 - +1.7 391,640 - +0.6 391,640 - -1.1 391,640 - -0.4 391,640 - +1.2 391,645 + +0.5 391,678 + -0.1 391,678 + +0.3 391,716 - -0.8 391,726 - +0.8 391,726 - -0.6 391,773 + -0.6 391,791 - +0.1 391,793 - -1.7 391,854 - +0.2 393,374 + -0.0 393,409 - +0.2 393,416 + +1.4 393,481 + -0.3 393,559 - +0.6 393,566 + +0.7 393,566 + -1.2 393,574 - +0.9 393,574 - +0.3 393,592 + -1.7 393,592 + -1.1 393,600 - +0.4 393,600 - +3.0 393,600 - -0.3 393,696 - -0.0 393,779 - DVU0347 0.17 -0.9 393,789 - DVU0347 0.19 -2.7 393,792 - DVU0347 0.19 +2.3 393,809 - DVU0347 0.22 -0.9 393,859 + DVU0347 0.29 -1.1 393,867 - DVU0347 0.30 -0.5 393,876 - DVU0347 0.32 -0.6 394,039 - DVU0347 0.56 +0.6 394,118 - DVU0347 0.68 -0.4 394,209 + DVU0347 0.81 -1.0 394,226 - DVU0347 0.84 -0.0 394,281 + -0.0 394,309 - +0.5 394,319 - -1.0
Or see this region's nucleotide sequence