Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2575 and DVU2576 overlap by 4 nucleotides DVU2576 and DVU2577 are separated by 94 nucleotides DVU2577 and tRNA-Leu are separated by 131 nucleotides
DVU2575: DVU2575 - peptidase, M20/M25/M40 family (TIGR), at 2,688,199 to 2,689,299
DVU2575
DVU2576: DVU2576 - oligopeptide ABC transporter, ATP-binding protein (TIGR), at 2,689,296 to 2,690,261
DVU2576
DVU2577: DVU2577 - DNA-binding response regulator, LuxR family (TIGR), at 2,690,356 to 2,691,006
DVU2577
DVU_tRNA-Leu-6: tRNA-Leu - tRNA with anticodon CAG for Leu (VIMSS-AUTO), at 2,691,138 to 2,691,224
tRNA-Leu
Position (kb)
2689
2690
2691 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2688.305 kb on - strand at 2688.374 kb on - strand, within DVU2575 at 2688.394 kb on + strand, within DVU2575 at 2688.402 kb on + strand, within DVU2575 at 2688.402 kb on - strand, within DVU2575 at 2688.444 kb on + strand, within DVU2575 at 2688.452 kb on - strand, within DVU2575 at 2688.452 kb on - strand, within DVU2575 at 2688.506 kb on - strand, within DVU2575 at 2688.526 kb on - strand, within DVU2575 at 2688.569 kb on - strand, within DVU2575 at 2688.745 kb on + strand, within DVU2575 at 2688.745 kb on + strand, within DVU2575 at 2688.767 kb on + strand, within DVU2575 at 2688.839 kb on + strand, within DVU2575 at 2688.852 kb on - strand, within DVU2575 at 2688.873 kb on - strand, within DVU2575 at 2688.892 kb on - strand, within DVU2575 at 2688.928 kb on + strand, within DVU2575 at 2688.965 kb on + strand, within DVU2575 at 2688.968 kb on - strand, within DVU2575 at 2689.049 kb on - strand, within DVU2575 at 2689.087 kb on + strand, within DVU2575 at 2689.087 kb on + strand, within DVU2575 at 2689.089 kb on + strand, within DVU2575 at 2689.095 kb on - strand, within DVU2575 at 2689.117 kb on + strand, within DVU2575 at 2689.185 kb on - strand, within DVU2575 at 2689.191 kb on + strand at 2689.199 kb on - strand at 2689.219 kb on - strand at 2689.228 kb on + strand at 2689.251 kb on + strand at 2689.298 kb on + strand at 2689.299 kb on + strand at 2689.317 kb on + strand at 2689.335 kb on + strand at 2689.381 kb on + strand at 2689.406 kb on + strand, within DVU2576 at 2689.406 kb on + strand, within DVU2576 at 2689.407 kb on - strand, within DVU2576 at 2689.439 kb on + strand, within DVU2576 at 2689.439 kb on + strand, within DVU2576 at 2689.441 kb on + strand, within DVU2576 at 2689.447 kb on - strand, within DVU2576 at 2689.449 kb on + strand, within DVU2576 at 2689.460 kb on + strand, within DVU2576 at 2689.516 kb on + strand, within DVU2576 at 2689.524 kb on - strand, within DVU2576 at 2689.568 kb on + strand, within DVU2576 at 2689.571 kb on + strand, within DVU2576 at 2689.593 kb on + strand, within DVU2576 at 2689.593 kb on + strand, within DVU2576 at 2689.693 kb on + strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.723 kb on + strand, within DVU2576 at 2689.802 kb on - strand, within DVU2576 at 2689.810 kb on - strand, within DVU2576 at 2689.821 kb on - strand, within DVU2576 at 2689.831 kb on + strand, within DVU2576 at 2689.841 kb on + strand, within DVU2576 at 2689.848 kb on + strand, within DVU2576 at 2689.923 kb on - strand, within DVU2576 at 2690.006 kb on + strand, within DVU2576 at 2690.006 kb on - strand, within DVU2576 at 2690.042 kb on + strand, within DVU2576 at 2690.050 kb on - strand, within DVU2576 at 2690.065 kb on + strand, within DVU2576 at 2690.145 kb on + strand, within DVU2576 at 2690.310 kb on - strand at 2690.343 kb on - strand at 2690.358 kb on + strand at 2690.414 kb on - strand at 2690.418 kb on + strand at 2690.455 kb on + strand, within DVU2577 at 2690.520 kb on + strand, within DVU2577 at 2690.535 kb on - strand, within DVU2577 at 2690.648 kb on + strand, within DVU2577 at 2690.650 kb on - strand, within DVU2577 at 2690.699 kb on - strand, within DVU2577 at 2690.921 kb on - strand, within DVU2577 at 2691.032 kb on + strand at 2691.244 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 2,688,305 - +0.1 2,688,374 - DVU2575 0.16 +0.9 2,688,394 + DVU2575 0.18 -1.3 2,688,402 + DVU2575 0.18 +0.2 2,688,402 - DVU2575 0.18 +0.5 2,688,444 + DVU2575 0.22 -0.4 2,688,452 - DVU2575 0.23 -0.2 2,688,452 - DVU2575 0.23 +0.9 2,688,506 - DVU2575 0.28 -0.2 2,688,526 - DVU2575 0.30 +0.0 2,688,569 - DVU2575 0.34 -1.0 2,688,745 + DVU2575 0.50 +0.2 2,688,745 + DVU2575 0.50 +0.0 2,688,767 + DVU2575 0.52 -0.2 2,688,839 + DVU2575 0.58 +1.2 2,688,852 - DVU2575 0.59 +0.2 2,688,873 - DVU2575 0.61 -0.4 2,688,892 - DVU2575 0.63 -0.9 2,688,928 + DVU2575 0.66 +0.2 2,688,965 + DVU2575 0.70 +0.2 2,688,968 - DVU2575 0.70 +0.7 2,689,049 - DVU2575 0.77 +0.2 2,689,087 + DVU2575 0.81 -0.7 2,689,087 + DVU2575 0.81 +0.7 2,689,089 + DVU2575 0.81 -2.3 2,689,095 - DVU2575 0.81 -1.1 2,689,117 + DVU2575 0.83 +3.5 2,689,185 - DVU2575 0.90 -1.6 2,689,191 + -0.0 2,689,199 - +0.1 2,689,219 - -0.6 2,689,228 + -2.7 2,689,251 + +0.9 2,689,298 + -1.2 2,689,299 + +0.0 2,689,317 + -1.9 2,689,335 + -0.3 2,689,381 + +2.6 2,689,406 + DVU2576 0.11 -0.5 2,689,406 + DVU2576 0.11 -1.6 2,689,407 - DVU2576 0.11 -0.4 2,689,439 + DVU2576 0.15 -1.7 2,689,439 + DVU2576 0.15 -1.7 2,689,441 + DVU2576 0.15 -2.0 2,689,447 - DVU2576 0.16 -1.4 2,689,449 + DVU2576 0.16 -0.2 2,689,460 + DVU2576 0.17 -0.6 2,689,516 + DVU2576 0.23 -0.1 2,689,524 - DVU2576 0.24 -0.8 2,689,568 + DVU2576 0.28 -1.0 2,689,571 + DVU2576 0.28 -1.2 2,689,593 + DVU2576 0.31 +0.0 2,689,593 + DVU2576 0.31 -1.6 2,689,693 + DVU2576 0.41 -0.1 2,689,701 - DVU2576 0.42 +0.3 2,689,701 - DVU2576 0.42 +0.9 2,689,701 - DVU2576 0.42 -0.3 2,689,723 + DVU2576 0.44 -0.1 2,689,802 - DVU2576 0.52 -0.6 2,689,810 - DVU2576 0.53 -0.5 2,689,821 - DVU2576 0.54 -1.7 2,689,831 + DVU2576 0.55 -0.7 2,689,841 + DVU2576 0.56 +0.5 2,689,848 + DVU2576 0.57 -0.4 2,689,923 - DVU2576 0.65 -0.7 2,690,006 + DVU2576 0.73 -0.3 2,690,006 - DVU2576 0.73 -0.0 2,690,042 + DVU2576 0.77 -0.9 2,690,050 - DVU2576 0.78 -2.8 2,690,065 + DVU2576 0.80 -0.3 2,690,145 + DVU2576 0.88 -0.4 2,690,310 - -0.9 2,690,343 - +1.6 2,690,358 + +0.7 2,690,414 - -0.7 2,690,418 + -0.1 2,690,455 + DVU2577 0.15 -1.0 2,690,520 + DVU2577 0.25 -0.5 2,690,535 - DVU2577 0.27 -0.0 2,690,648 + DVU2577 0.45 -0.9 2,690,650 - DVU2577 0.45 -0.8 2,690,699 - DVU2577 0.53 +0.2 2,690,921 - DVU2577 0.87 -1.6 2,691,032 + +0.3 2,691,244 - -0.1
Or see this region's nucleotide sequence