Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2203

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
2,298,331	+		DVU2202	0.57	+0.4
2,298,461	+		DVU2202	0.65	+0.3
2,298,462	-		DVU2202	0.65	-0.3
2,298,463	-		DVU2202	0.65	-1.1
2,298,527	+		DVU2202	0.70	-1.0
2,298,577	-		DVU2202	0.73	+0.1
2,298,714	-		DVU2202	0.82	-0.1
2,298,773	-		DVU2202	0.86	+0.0
2,298,773	-		DVU2202	0.86	-0.0
2,298,777	+		DVU2202	0.86	-0.7
2,298,868	+				+0.5
2,298,868	+				-1.2
2,298,868	+				-0.8
2,298,876	-				-0.1
2,298,876	-				-0.0
2,298,876	-				-0.7
2,298,876	-				-1.2
2,298,934	-				+0.4
2,298,990	-				-0.9
2,299,082	+				-1.0
2,299,091	-				+0.6
2,299,099	+				+0.5
2,299,109	+				-0.4
2,299,109	+				+1.0
2,299,117	-				-2.7
2,299,117	-				-0.8
2,299,332	+				-0.0
2,299,340	-				-0.8
2,299,405	-		DVU2203	0.25	-0.3
2,299,533	-		DVU2203	0.59	-2.5
2,299,644	-		DVU2203	0.89	-0.8
2,299,654	+				-1.3
2,299,806	+				+0.1
2,299,862	-				-1.0
2,299,864	-				-0.3
2,299,922	+				-0.9
2,299,996	+	tnaA	DVU2204	0.14	-0.2
2,300,010	-	tnaA	DVU2204	0.15	+0.9
2,300,061	+	tnaA	DVU2204	0.19	+0.4
2,300,062	-	tnaA	DVU2204	0.19	+0.2
2,300,075	+	tnaA	DVU2204	0.20	+0.3
2,300,083	-	tnaA	DVU2204	0.21	-1.0
2,300,111	+	tnaA	DVU2204	0.23	-1.0
2,300,113	-	tnaA	DVU2204	0.23	+0.2
2,300,240	-	tnaA	DVU2204	0.32	+0.8
2,300,285	-	tnaA	DVU2204	0.35	+0.2
2,300,430	+	tnaA	DVU2204	0.46	+0.3
2,300,430	+	tnaA	DVU2204	0.46	-0.4
2,300,488	+	tnaA	DVU2204	0.50	-0.1
2,300,488	+	tnaA	DVU2204	0.50	-2.4
2,300,488	+	tnaA	DVU2204	0.50	+0.6
2,300,550	+	tnaA	DVU2204	0.54	-3.4
2,300,563	-	tnaA	DVU2204	0.55	-0.7
2,300,579	-	tnaA	DVU2204	0.56	-0.4