Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2157

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
2,256,586	+		DVU2154	0.80	+0.8
2,256,614	+		DVU2154	0.87	-2.0
2,256,622	-		DVU2154	0.88	+0.3
2,256,638	+				-0.8
2,256,645	+				-2.6
2,256,676	-				-0.1
2,256,727	+		DVU2155	0.13	-1.0
2,256,733	-		DVU2155	0.15	-1.0
2,256,775	+		DVU2155	0.25	-0.2
2,256,813	+		DVU2155	0.34	-0.9
2,256,832	+		DVU2155	0.38	-1.1
2,256,843	+		DVU2155	0.41	-0.3
2,256,862	-		DVU2155	0.45	-1.0
2,256,876	-		DVU2155	0.48	+0.3
2,256,876	-		DVU2155	0.48	+0.2
2,256,925	+		DVU2155	0.60	+0.1
2,256,925	+		DVU2155	0.60	-0.0
2,256,933	-		DVU2155	0.62	-0.8
2,256,933	-		DVU2155	0.62	+0.4
2,257,037	+		DVU2155	0.86	+0.0
2,257,110	+				-0.7
2,257,110	-				-2.0
2,257,112	+				-1.4
2,257,118	-				+0.3
2,257,165	-				-1.2
2,257,242	-		DVU2156	0.18	+0.3
2,257,242	-		DVU2156	0.18	+0.0
2,257,260	-		DVU2156	0.23	-1.1
2,257,357	+		DVU2156	0.49	-1.2
2,257,367	+		DVU2156	0.52	-1.1
2,257,399	+		DVU2156	0.61	-1.1
2,257,399	+		DVU2156	0.61	-0.0
2,257,399	+		DVU2156	0.61	-1.9
2,257,399	+		DVU2156	0.61	-0.3
2,257,399	+		DVU2156	0.61	+0.4
2,257,399	+		DVU2156	0.61	-1.0
2,257,399	+		DVU2156	0.61	+0.6
2,257,407	-		DVU2156	0.63	-0.0
2,257,407	-		DVU2156	0.63	-1.9
2,257,407	-		DVU2156	0.63	+1.1
2,257,417	+		DVU2156	0.66	+0.1
2,257,430	+		DVU2156	0.69	+1.0
2,257,494	-		DVU2156	0.87	-1.8
2,257,591	-				-1.0
2,257,659	-				-0.3
2,257,751	-				-1.2
2,257,808	-				-0.7
2,257,865	-		DVU2157	0.11	-0.5
2,258,031	+		DVU2157	0.17	-0.5
2,258,039	-		DVU2157	0.17	-0.2
2,258,049	-		DVU2157	0.17	+0.2
2,258,108	-		DVU2157	0.19	-0.9
2,258,108	-		DVU2157	0.19	+0.3
2,258,169	+		DVU2157	0.21	-0.8
2,258,204	-		DVU2157	0.23	-2.4
2,258,596	+		DVU2157	0.36	+0.1
2,258,604	-		DVU2157	0.36	+0.6
2,258,616	-		DVU2157	0.37	+1.0
2,258,640	+		DVU2157	0.38	-1.1
2,258,678	-		DVU2157	0.39	-2.3
2,258,711	+		DVU2157	0.40	-3.2
2,258,727	-		DVU2157	0.41	-0.6
2,258,876	-		DVU2157	0.46	-0.6
2,258,876	-		DVU2157	0.46	-3.5
2,258,876	-		DVU2157	0.46	-1.0
2,258,876	-		DVU2157	0.46	-0.6
2,258,876	-		DVU2157	0.46	-0.7
2,258,928	-		DVU2157	0.47	-1.5
2,258,954	+		DVU2157	0.48	+0.6
2,258,954	+		DVU2157	0.48	-0.1
2,258,994	-		DVU2157	0.50	+0.6
2,258,998	-		DVU2157	0.50	-0.2
2,259,041	+		DVU2157	0.51	+0.3
2,259,046	+		DVU2157	0.52	+0.6
2,259,074	-		DVU2157	0.52	+0.2
2,259,091	+		DVU2157	0.53	-0.5
2,259,096	+		DVU2157	0.53	-0.1
2,259,251	+		DVU2157	0.59	+0.1
2,259,321	+		DVU2157	0.61	+0.1
2,259,321	+		DVU2157	0.61	+0.1
2,259,329	-		DVU2157	0.61	+0.1
2,259,352	-		DVU2157	0.62	-0.7
2,259,389	+		DVU2157	0.63	+0.8
2,259,389	+		DVU2157	0.63	+0.5
2,259,426	+		DVU2157	0.65	-2.5
2,259,509	+		DVU2157	0.67	-0.8
2,259,566	+		DVU2157	0.69	-1.1
2,259,574	-		DVU2157	0.70	+0.2
2,259,579	-		DVU2157	0.70	+0.9
2,259,650	-		DVU2157	0.72	-1.0
2,259,709	+		DVU2157	0.74	+0.1
2,259,835	-		DVU2157	0.79	+0.4
2,260,136	+		DVU2157	0.89	-1.4
2,260,136	+		DVU2157	0.89	-0.9
2,260,141	+		DVU2157	0.89	-0.4
2,260,156	-		DVU2157	0.89	-0.3
2,260,238	+				-0.9
2,260,238	+				-1.5
2,260,294	-				+1.2
2,260,374	+				-1.1
2,260,458	+				+0.4
2,260,518	-		DORF16094	0.25	-0.3
2,260,571	+		DORF16094	0.50	-1.5
2,260,584	-		DORF16094	0.56	+1.2
2,260,594	-		DORF16094	0.61	+0.3
2,260,643	+		DORF16094	0.84	-0.0
2,260,680	+				+0.0
2,260,729	-				-0.5
2,260,772	+				-0.3
2,260,786	-				-0.6
2,260,786	-				+0.3
2,260,795	-				-0.7
2,260,825	-		DVU2158	0.18	+0.1
2,260,827	+		DVU2158	0.19	-1.9
2,260,903	-		DVU2158	0.40	-0.1
2,260,934	-		DVU2158	0.49	-0.4
2,260,965	+		DVU2158	0.58	-0.1
2,260,979	-		DVU2158	0.62	-2.6
2,261,031	+		DVU2158	0.77	-1.8
2,261,136	+				+0.4
2,261,144	-				+1.2
2,261,166	-				-0.5
2,261,234	+		DVU2159	0.12	+1.1
2,261,238	+		DVU2159	0.12	-0.0
2,261,308	+		DVU2159	0.20	+0.4
2,261,308	+		DVU2159	0.20	-0.1
2,261,316	-		DVU2159	0.21	-0.4
2,261,316	-		DVU2159	0.21	+1.0
2,261,316	-		DVU2159	0.21	+0.2
2,261,342	+		DVU2159	0.23	+0.3
2,261,371	-		DVU2159	0.27	+1.1
2,261,434	-		DVU2159	0.33	-1.8