Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2090

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
2,178,585	+		DVU2088	0.23	-0.3
2,178,634	-		DVU2088	0.28	-0.3
2,178,674	+		DVU2088	0.32	-0.1
2,178,674	+		DVU2088	0.32	-2.8
2,178,694	+		DVU2088	0.34	+0.2
2,178,859	-		DVU2088	0.52	-0.1
2,178,955	-		DVU2088	0.63	-1.0
2,178,955	-		DVU2088	0.63	-1.0
2,178,957	+		DVU2088	0.63	+0.1
2,178,995	+		DVU2088	0.67	-0.9
2,179,090	+		DVU2088	0.77	+0.7
2,179,092	-		DVU2088	0.78	-0.1
2,179,098	-		DVU2088	0.78	+0.3
2,179,098	-		DVU2088	0.78	-0.3
2,179,148	+		DVU2088	0.84	+0.3
2,179,217	-				-0.3
2,179,272	+				-0.0
2,179,329	+				-0.3
2,179,329	+				-0.3
2,179,351	+				+0.1
2,179,464	+				+1.0
2,179,566	-				-0.0
2,179,586	+				-0.1
2,179,630	-				+0.0
2,179,635	-				+0.3
2,180,033	+		DVU2090	0.56	+1.0
2,180,068	+		DVU2090	0.60	+0.0
2,180,176	-		DVU2090	0.73	+0.7
2,180,198	+		DVU2090	0.75	+0.2
2,180,206	-		DVU2090	0.76	+0.3
2,180,227	+		DVU2090	0.79	+0.0
2,180,227	+		DVU2090	0.79	+0.2
2,180,263	+		DVU2090	0.83	+1.0
2,180,366	+				-0.2
2,180,440	-				+0.8
2,180,452	+				-1.2
2,180,467	+				-0.3
2,180,540	+				-0.8
2,180,600	+				-0.4
2,180,610	+	thiE-1	DVU2091	0.10	-1.0
2,180,687	+	thiE-1	DVU2091	0.22	-0.3
2,180,849	+	thiE-1	DVU2091	0.46	-0.5
2,180,857	-	thiE-1	DVU2091	0.47	-0.3
2,180,859	+	thiE-1	DVU2091	0.47	-1.2
2,180,919	+	thiE-1	DVU2091	0.56	-0.6
2,181,090	+	thiE-1	DVU2091	0.81	-0.2
2,181,093	-	thiE-1	DVU2091	0.81	-3.1
2,181,093	-	thiE-1	DVU2091	0.81	+0.2
2,181,108	-	thiE-1	DVU2091	0.84	+0.3
2,181,192	+				+0.2
2,181,236	-				+0.2