Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1871

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
1,937,275	+		DVU1870	0.22	-0.7
1,937,347	-		DVU1870	0.31	-0.5
1,937,419	-		DVU1870	0.40	+0.8
1,937,489	-		DVU1870	0.49	-0.9
1,937,500	-		DVU1870	0.50	-1.1
1,937,526	+		DVU1870	0.53	-2.8
1,937,561	-		DVU1870	0.58	+0.1
1,937,660	-		DVU1870	0.70	-0.1
1,937,687	-		DVU1870	0.74	-0.5
1,937,755	+		DVU1870	0.82	+0.3
1,937,766	-		DVU1870	0.83	-0.4
1,937,892	+				-1.9
1,937,914	-				+0.1
1,937,916	+				-0.3
1,937,924	-				+0.3
1,938,101	-				-0.4
1,938,102	+				+0.2
1,938,107	+				+0.2
1,938,139	+				+0.6
1,938,141	+				-0.0
1,938,147	-				-1.6
1,938,279	+				-0.3
1,938,287	-				+0.4
1,938,406	+	aspA	DVU1871	0.18	-0.7
1,938,546	+	aspA	DVU1871	0.28	+0.3
1,938,629	-	aspA	DVU1871	0.34	-0.8
1,938,978	-	aspA	DVU1871	0.59	-0.7
1,939,082	-	aspA	DVU1871	0.66	-2.8
1,939,336	-	aspA	DVU1871	0.84	+0.1
1,939,545	+				+0.1
1,939,545	+				-0.7
1,939,650	-				-2.2
1,939,664	-				+0.1
1,939,700	-				-0.7
1,939,738	-				-4.0
1,939,909	-				-0.1
1,940,058	+				-0.7
1,940,156	+	ppiB-2	DVU1873	0.17	+0.1
1,940,156	+	ppiB-2	DVU1873	0.17	+0.1
1,940,156	+	ppiB-2	DVU1873	0.17	-0.6
1,940,164	-	ppiB-2	DVU1873	0.18	-0.8
1,940,182	-	ppiB-2	DVU1873	0.22	+0.3
1,940,190	-	ppiB-2	DVU1873	0.23	-0.4
1,940,212	+	ppiB-2	DVU1873	0.28	-1.9