Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1128 and DVU1129 overlap by 1 nucleotides DVU1129 and DVU1130 are separated by 73 nucleotides DVU1130 and DVU1131 overlap by 17 nucleotides DVU1131 and DVU1132 overlap by 4 nucleotides DVU1132 and DVU1133 overlap by 37 nucleotides
DVU1128: DVU1128 - lysozyme, putative (TIGR), at 1,230,114 to 1,230,779
DVU1128
DVU1129: DVU1129 - conserved hypothetical protein (TIGR), at 1,230,779 to 1,231,147
DVU1129
DVU1130: DVU1130 - DNA-binding protein (TIGR), at 1,231,221 to 1,231,685
DVU1130
DVU1131: DVU1131 - hypothetical protein (TIGR), at 1,231,669 to 1,232,034
DVU1131
DVU1132: DVU1132 - conserved hypothetical protein (TIGR), at 1,232,031 to 1,232,540
DVU1132
DVU1133: DVU1133 - hypothetical protein (TIGR), at 1,232,504 to 1,232,962
DVU1133
Position (kb)
1231
1232
1233 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1230.779 kb on + strand at 1230.889 kb on - strand, within DVU1129 at 1230.889 kb on - strand, within DVU1129 at 1230.936 kb on + strand, within DVU1129 at 1230.996 kb on + strand, within DVU1129 at 1231.006 kb on - strand, within DVU1129 at 1231.049 kb on - strand, within DVU1129 at 1231.080 kb on - strand, within DVU1129 at 1231.213 kb on + strand at 1231.310 kb on - strand, within DVU1130 at 1231.317 kb on + strand, within DVU1130 at 1231.382 kb on + strand, within DVU1130 at 1231.403 kb on - strand, within DVU1130 at 1231.476 kb on + strand, within DVU1130 at 1231.539 kb on - strand, within DVU1130 at 1231.588 kb on + strand, within DVU1130 at 1231.598 kb on - strand, within DVU1130 at 1231.727 kb on + strand, within DVU1131 at 1231.727 kb on + strand, within DVU1131 at 1231.758 kb on + strand, within DVU1131 at 1231.776 kb on - strand, within DVU1131 at 1231.777 kb on + strand, within DVU1131 at 1231.783 kb on - strand, within DVU1131 at 1231.784 kb on + strand, within DVU1131 at 1231.836 kb on - strand, within DVU1131 at 1231.869 kb on - strand, within DVU1131 at 1232.257 kb on - strand, within DVU1132 at 1232.287 kb on - strand, within DVU1132 at 1232.344 kb on + strand, within DVU1132 at 1232.474 kb on + strand, within DVU1132 at 1232.479 kb on + strand, within DVU1132 at 1232.479 kb on + strand, within DVU1132 at 1232.479 kb on + strand, within DVU1132 at 1232.487 kb on - strand, within DVU1132 at 1232.554 kb on + strand, within DVU1133 at 1232.578 kb on + strand, within DVU1133 at 1232.689 kb on + strand, within DVU1133 at 1232.836 kb on + strand, within DVU1133 at 1232.890 kb on + strand, within DVU1133 at 1232.903 kb on + strand, within DVU1133
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 1,230,779 + -1.6 1,230,889 - DVU1129 0.30 -0.4 1,230,889 - DVU1129 0.30 +0.2 1,230,936 + DVU1129 0.43 -0.4 1,230,996 + DVU1129 0.59 +0.2 1,231,006 - DVU1129 0.62 -0.3 1,231,049 - DVU1129 0.73 -0.6 1,231,080 - DVU1129 0.82 +0.2 1,231,213 + -0.1 1,231,310 - DVU1130 0.19 -1.0 1,231,317 + DVU1130 0.21 +0.8 1,231,382 + DVU1130 0.35 +0.0 1,231,403 - DVU1130 0.39 +0.1 1,231,476 + DVU1130 0.55 +0.4 1,231,539 - DVU1130 0.68 +0.1 1,231,588 + DVU1130 0.79 +0.2 1,231,598 - DVU1130 0.81 -1.6 1,231,727 + DVU1131 0.16 +0.3 1,231,727 + DVU1131 0.16 -0.8 1,231,758 + DVU1131 0.24 -0.4 1,231,776 - DVU1131 0.29 -1.9 1,231,777 + DVU1131 0.30 -3.2 1,231,783 - DVU1131 0.31 -2.7 1,231,784 + DVU1131 0.31 +0.2 1,231,836 - DVU1131 0.46 +0.6 1,231,869 - DVU1131 0.55 +0.2 1,232,257 - DVU1132 0.44 -0.2 1,232,287 - DVU1132 0.50 -0.2 1,232,344 + DVU1132 0.61 -0.2 1,232,474 + DVU1132 0.87 +0.1 1,232,479 + DVU1132 0.88 -1.1 1,232,479 + DVU1132 0.88 -1.1 1,232,479 + DVU1132 0.88 -3.5 1,232,487 - DVU1132 0.89 -1.2 1,232,554 + DVU1133 0.11 -0.7 1,232,578 + DVU1133 0.16 -0.1 1,232,689 + DVU1133 0.40 -0.1 1,232,836 + DVU1133 0.72 -0.1 1,232,890 + DVU1133 0.84 +0.0 1,232,903 + DVU1133 0.87 -1.6
Or see this region's nucleotide sequence