Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliF and fliE are separated by 51 nucleotides fliE and flgC are separated by 14 nucleotides flgC and flgB overlap by 1 nucleotides
DVU0313: fliF - flagellar M-ring protein FliF (TIGR), at 357,946 to 359,562
fliF
DVU0314: fliE - flagellar basal body component FliE (TIGR), at 359,614 to 359,949
fliE
DVU0315: flgC - flagellar basal-body rod protein FlgC (TIGR), at 359,964 to 360,401
flgC
DVU0316: flgB - flagellar basal-body rod protein FlgB (TIGR), at 360,401 to 360,811
flgB
Position (kb) 359
360 Strain fitness (log2 ratio) -2
-1
0
1 at 358.621 kb on - strand, within fliF at 358.640 kb on + strand, within fliF at 358.683 kb on + strand, within fliF at 358.691 kb on - strand, within fliF at 358.765 kb on - strand, within fliF at 358.772 kb on - strand, within fliF at 358.796 kb on + strand, within fliF at 358.796 kb on + strand, within fliF at 358.804 kb on - strand, within fliF at 358.804 kb on - strand, within fliF at 358.967 kb on - strand, within fliF at 358.986 kb on - strand, within fliF at 359.066 kb on + strand, within fliF at 359.105 kb on - strand, within fliF at 359.111 kb on - strand, within fliF at 359.212 kb on - strand, within fliF at 359.238 kb on - strand, within fliF at 359.290 kb on - strand, within fliF at 359.345 kb on + strand, within fliF at 359.414 kb on - strand at 359.584 kb on + strand at 359.587 kb on - strand at 359.654 kb on + strand, within fliE at 359.667 kb on + strand, within fliE at 359.674 kb on + strand, within fliE at 359.685 kb on + strand, within fliE at 359.685 kb on + strand, within fliE at 359.708 kb on - strand, within fliE at 359.756 kb on + strand, within fliE at 359.915 kb on + strand, within fliE at 359.999 kb on - strand at 360.016 kb on + strand, within flgC at 360.024 kb on - strand, within flgC at 360.031 kb on - strand, within flgC at 360.057 kb on - strand, within flgC at 360.084 kb on - strand, within flgC at 360.150 kb on - strand, within flgC at 360.187 kb on - strand, within flgC at 360.189 kb on + strand, within flgC at 360.202 kb on - strand, within flgC at 360.219 kb on - strand, within flgC at 360.219 kb on - strand, within flgC at 360.285 kb on + strand, within flgC at 360.304 kb on + strand, within flgC at 360.304 kb on + strand, within flgC at 360.312 kb on - strand, within flgC at 360.334 kb on + strand, within flgC at 360.396 kb on - strand at 360.486 kb on - strand, within flgB at 360.525 kb on - strand, within flgB at 360.650 kb on + strand, within flgB at 360.652 kb on - strand, within flgB at 360.834 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 358,621 - fliF DVU0313 0.42 +1.0 358,640 + fliF DVU0313 0.43 -2.7 358,683 + fliF DVU0313 0.46 -0.4 358,691 - fliF DVU0313 0.46 -0.2 358,765 - fliF DVU0313 0.51 -1.6 358,772 - fliF DVU0313 0.51 -1.7 358,796 + fliF DVU0313 0.53 -1.0 358,796 + fliF DVU0313 0.53 -0.8 358,804 - fliF DVU0313 0.53 -0.5 358,804 - fliF DVU0313 0.53 -1.0 358,967 - fliF DVU0313 0.63 -2.5 358,986 - fliF DVU0313 0.64 -1.8 359,066 + fliF DVU0313 0.69 +0.0 359,105 - fliF DVU0313 0.72 -0.5 359,111 - fliF DVU0313 0.72 -1.2 359,212 - fliF DVU0313 0.78 +0.2 359,238 - fliF DVU0313 0.80 -0.6 359,290 - fliF DVU0313 0.83 -1.3 359,345 + fliF DVU0313 0.87 -0.6 359,414 - -0.8 359,584 + -0.0 359,587 - -0.6 359,654 + fliE DVU0314 0.12 -0.9 359,667 + fliE DVU0314 0.16 -0.4 359,674 + fliE DVU0314 0.18 -1.7 359,685 + fliE DVU0314 0.21 -1.9 359,685 + fliE DVU0314 0.21 +0.0 359,708 - fliE DVU0314 0.28 -0.8 359,756 + fliE DVU0314 0.42 -2.5 359,915 + fliE DVU0314 0.90 -0.5 359,999 - -0.5 360,016 + flgC DVU0315 0.12 -1.5 360,024 - flgC DVU0315 0.14 -0.6 360,031 - flgC DVU0315 0.15 -2.4 360,057 - flgC DVU0315 0.21 +0.7 360,084 - flgC DVU0315 0.27 -1.4 360,150 - flgC DVU0315 0.42 -1.2 360,187 - flgC DVU0315 0.51 -0.7 360,189 + flgC DVU0315 0.51 -1.2 360,202 - flgC DVU0315 0.54 -1.5 360,219 - flgC DVU0315 0.58 -1.0 360,219 - flgC DVU0315 0.58 -1.1 360,285 + flgC DVU0315 0.73 -1.0 360,304 + flgC DVU0315 0.78 -0.7 360,304 + flgC DVU0315 0.78 -1.4 360,312 - flgC DVU0315 0.79 -1.6 360,334 + flgC DVU0315 0.84 -1.2 360,396 - -0.7 360,486 - flgB DVU0316 0.21 +0.2 360,525 - flgB DVU0316 0.30 +0.4 360,650 + flgB DVU0316 0.61 -0.7 360,652 - flgB DVU0316 0.61 -0.5 360,834 + +0.2
Or see this region's nucleotide sequence