Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3128 and DVU3129 are separated by 13 nucleotides DVU3129 and DVU3130 are separated by 75 nucleotides DVU3130 and DVU3131 are separated by 178 nucleotides DVU3131 and DVU3132 overlap by 4 nucleotides
DVU3128: DVU3128 - lipoprotein, putative (TIGR), at 3,276,158 to 3,276,775
DVU3128
DVU3129: DVU3129 - hypothetical protein (TIGR), at 3,276,789 to 3,276,956
DVU3129
DVU3130: DVU3130 - hypothetical protein (TIGR), at 3,277,032 to 3,277,244
DVU3130
DVU3131: DVU3131 - transcriptional regulator, putative (TIGR), at 3,277,423 to 3,278,370
DVU3131
DVU3132: DVU3132 - glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR), at 3,278,367 to 3,280,007
DVU3132
Position (kb)
3277
3278
3279 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3276.427 kb on + strand, within DVU3128 at 3276.469 kb on - strand, within DVU3128 at 3276.474 kb on - strand, within DVU3128 at 3276.485 kb on + strand, within DVU3128 at 3276.490 kb on + strand, within DVU3128 at 3276.493 kb on - strand, within DVU3128 at 3276.498 kb on - strand, within DVU3128 at 3276.555 kb on - strand, within DVU3128 at 3276.587 kb on - strand, within DVU3128 at 3276.605 kb on + strand, within DVU3128 at 3276.608 kb on - strand, within DVU3128 at 3276.613 kb on - strand, within DVU3128 at 3276.666 kb on + strand, within DVU3128 at 3276.671 kb on + strand, within DVU3128 at 3276.680 kb on - strand, within DVU3128 at 3276.698 kb on + strand, within DVU3128 at 3276.698 kb on + strand, within DVU3128 at 3276.706 kb on - strand, within DVU3128 at 3276.777 kb on - strand at 3276.892 kb on + strand, within DVU3129 at 3276.903 kb on + strand, within DVU3129 at 3276.958 kb on - strand at 3276.978 kb on + strand at 3276.978 kb on + strand at 3277.011 kb on - strand at 3277.634 kb on - strand, within DVU3131 at 3277.754 kb on - strand, within DVU3131 at 3277.767 kb on + strand, within DVU3131 at 3277.820 kb on + strand, within DVU3131 at 3277.828 kb on - strand, within DVU3131 at 3277.896 kb on + strand, within DVU3131 at 3277.905 kb on - strand, within DVU3131 at 3277.946 kb on + strand, within DVU3131 at 3277.954 kb on - strand, within DVU3131 at 3277.983 kb on + strand, within DVU3131 at 3277.983 kb on + strand, within DVU3131 at 3277.991 kb on - strand, within DVU3131 at 3278.025 kb on - strand, within DVU3131 at 3278.148 kb on - strand, within DVU3131 at 3278.214 kb on + strand, within DVU3131 at 3278.214 kb on + strand, within DVU3131 at 3278.221 kb on + strand, within DVU3131 at 3278.292 kb on - strand at 3278.349 kb on + strand at 3278.364 kb on + strand at 3278.372 kb on - strand at 3278.420 kb on + strand at 3278.479 kb on + strand at 3278.493 kb on + strand at 3278.566 kb on + strand, within DVU3132 at 3278.566 kb on + strand, within DVU3132 at 3278.574 kb on - strand, within DVU3132 at 3278.582 kb on + strand, within DVU3132 at 3278.615 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.651 kb on - strand, within DVU3132 at 3278.674 kb on - strand, within DVU3132 at 3278.747 kb on - strand, within DVU3132 at 3278.762 kb on + strand, within DVU3132 at 3278.775 kb on - strand, within DVU3132 at 3278.845 kb on - strand, within DVU3132 at 3278.850 kb on + strand, within DVU3132 at 3278.896 kb on + strand, within DVU3132 at 3278.949 kb on - strand, within DVU3132 at 3278.978 kb on + strand, within DVU3132 at 3278.991 kb on + strand, within DVU3132 at 3278.999 kb on - strand, within DVU3132 at 3278.999 kb on - strand, within DVU3132 at 3279.000 kb on + strand, within DVU3132 at 3279.052 kb on + strand, within DVU3132 at 3279.117 kb on - strand, within DVU3132 at 3279.156 kb on + strand, within DVU3132 at 3279.209 kb on + strand, within DVU3132 at 3279.229 kb on + strand, within DVU3132 at 3279.266 kb on - strand, within DVU3132
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 3,276,427 + DVU3128 0.44 -1.8 3,276,469 - DVU3128 0.50 -0.7 3,276,474 - DVU3128 0.51 -0.2 3,276,485 + DVU3128 0.53 -0.7 3,276,490 + DVU3128 0.54 -0.4 3,276,493 - DVU3128 0.54 +0.8 3,276,498 - DVU3128 0.55 -1.9 3,276,555 - DVU3128 0.64 +0.1 3,276,587 - DVU3128 0.69 -0.2 3,276,605 + DVU3128 0.72 -0.6 3,276,608 - DVU3128 0.73 +0.2 3,276,613 - DVU3128 0.74 -1.8 3,276,666 + DVU3128 0.82 +0.1 3,276,671 + DVU3128 0.83 -0.6 3,276,680 - DVU3128 0.84 +0.1 3,276,698 + DVU3128 0.87 +0.6 3,276,698 + DVU3128 0.87 -0.7 3,276,706 - DVU3128 0.89 -0.7 3,276,777 - -0.2 3,276,892 + DVU3129 0.61 +0.3 3,276,903 + DVU3129 0.68 +0.1 3,276,958 - -0.2 3,276,978 + +0.9 3,276,978 + -0.2 3,277,011 - -1.0 3,277,634 - DVU3131 0.22 +1.3 3,277,754 - DVU3131 0.35 -0.3 3,277,767 + DVU3131 0.36 -0.5 3,277,820 + DVU3131 0.42 +0.2 3,277,828 - DVU3131 0.43 -0.3 3,277,896 + DVU3131 0.50 +0.3 3,277,905 - DVU3131 0.51 -0.9 3,277,946 + DVU3131 0.55 -0.6 3,277,954 - DVU3131 0.56 -1.8 3,277,983 + DVU3131 0.59 -0.5 3,277,983 + DVU3131 0.59 -1.1 3,277,991 - DVU3131 0.60 -1.3 3,278,025 - DVU3131 0.64 -1.7 3,278,148 - DVU3131 0.76 -1.0 3,278,214 + DVU3131 0.83 +0.2 3,278,214 + DVU3131 0.83 -3.1 3,278,221 + DVU3131 0.84 -0.7 3,278,292 - +1.1 3,278,349 + -0.5 3,278,364 + -1.4 3,278,372 - +0.2 3,278,420 + -0.0 3,278,479 + -0.5 3,278,493 + -0.5 3,278,566 + DVU3132 0.12 -0.4 3,278,566 + DVU3132 0.12 -0.2 3,278,574 - DVU3132 0.13 +0.8 3,278,582 + DVU3132 0.13 +0.2 3,278,615 + DVU3132 0.15 -0.2 3,278,636 + DVU3132 0.16 -0.7 3,278,636 + DVU3132 0.16 +0.4 3,278,636 + DVU3132 0.16 +3.7 3,278,636 + DVU3132 0.16 +0.2 3,278,651 - DVU3132 0.17 +3.1 3,278,674 - DVU3132 0.19 +0.9 3,278,747 - DVU3132 0.23 +0.7 3,278,762 + DVU3132 0.24 -0.2 3,278,775 - DVU3132 0.25 -1.5 3,278,845 - DVU3132 0.29 -0.5 3,278,850 + DVU3132 0.29 +0.2 3,278,896 + DVU3132 0.32 -0.5 3,278,949 - DVU3132 0.35 -0.5 3,278,978 + DVU3132 0.37 +0.2 3,278,991 + DVU3132 0.38 -0.5 3,278,999 - DVU3132 0.39 -0.6 3,278,999 - DVU3132 0.39 -0.3 3,279,000 + DVU3132 0.39 -0.1 3,279,052 + DVU3132 0.42 -1.0 3,279,117 - DVU3132 0.46 -2.0 3,279,156 + DVU3132 0.48 -0.8 3,279,209 + DVU3132 0.51 -2.7 3,279,229 + DVU3132 0.53 -1.0 3,279,266 - DVU3132 0.55 +0.3
Or see this region's nucleotide sequence