Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2494 and DVU2495 are separated by 74 nucleotides DVU2495 and DVU2496 are separated by 29 nucleotides DVU2496 and DVU2497 are separated by 235 nucleotides DVU2497 and DVU2498 are separated by 24 nucleotides
DVU2494: DVU2494 - peptidase, M48 family (TIGR), at 2,606,430 to 2,607,290
DVU2494
DVU2495: DVU2495 - thioesterase family protein (TIGR), at 2,607,365 to 2,607,898
DVU2495
DVU2496: DVU2496 - lipoprotein, putative (TIGR), at 2,607,928 to 2,608,380
DVU2496
DVU2497: DVU2497 - lipoprotein, putative (TIGR), at 2,608,616 to 2,609,350
DVU2497
DVU2498: DVU2498 - hypothetical protein (TIGR), at 2,609,375 to 2,609,668
DVU2498
Position (kb)
2607
2608
2609 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2607.085 kb on - strand, within DVU2494 at 2607.100 kb on - strand, within DVU2494 at 2607.208 kb on + strand at 2607.251 kb on + strand at 2607.285 kb on + strand at 2607.293 kb on - strand at 2607.361 kb on + strand at 2607.495 kb on + strand, within DVU2495 at 2607.771 kb on - strand, within DVU2495 at 2607.886 kb on + strand at 2607.906 kb on - strand at 2607.919 kb on - strand at 2608.034 kb on + strand, within DVU2496 at 2608.070 kb on + strand, within DVU2496 at 2608.281 kb on + strand, within DVU2496 at 2608.281 kb on + strand, within DVU2496 at 2608.281 kb on + strand, within DVU2496 at 2608.281 kb on + strand, within DVU2496 at 2608.289 kb on - strand, within DVU2496 at 2608.324 kb on + strand, within DVU2496 at 2608.336 kb on + strand at 2608.338 kb on + strand at 2608.403 kb on - strand at 2608.503 kb on + strand at 2608.566 kb on + strand at 2608.714 kb on - strand, within DVU2497 at 2608.806 kb on - strand, within DVU2497 at 2608.839 kb on + strand, within DVU2497 at 2608.860 kb on + strand, within DVU2497 at 2609.010 kb on - strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.050 kb on + strand, within DVU2497 at 2609.058 kb on - strand, within DVU2497 at 2609.058 kb on - strand, within DVU2497 at 2609.109 kb on + strand, within DVU2497 at 2609.145 kb on - strand, within DVU2497 at 2609.244 kb on + strand, within DVU2497 at 2609.353 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 2,607,085 - DVU2494 0.76 -1.3 2,607,100 - DVU2494 0.78 -2.5 2,607,208 + -1.4 2,607,251 + -0.4 2,607,285 + -0.2 2,607,293 - +1.2 2,607,361 + -0.2 2,607,495 + DVU2495 0.24 -1.8 2,607,771 - DVU2495 0.76 +0.3 2,607,886 + -1.4 2,607,906 - -0.2 2,607,919 - -1.1 2,608,034 + DVU2496 0.23 -2.0 2,608,070 + DVU2496 0.31 -0.8 2,608,281 + DVU2496 0.78 -0.6 2,608,281 + DVU2496 0.78 -0.9 2,608,281 + DVU2496 0.78 -0.2 2,608,281 + DVU2496 0.78 -0.9 2,608,289 - DVU2496 0.80 -0.0 2,608,324 + DVU2496 0.87 -4.0 2,608,336 + -2.9 2,608,338 + -1.5 2,608,403 - +0.2 2,608,503 + -0.2 2,608,566 + -1.4 2,608,714 - DVU2497 0.13 +0.1 2,608,806 - DVU2497 0.26 -0.6 2,608,839 + DVU2497 0.30 +0.4 2,608,860 + DVU2497 0.33 +0.1 2,609,010 - DVU2497 0.54 -0.6 2,609,050 + DVU2497 0.59 -0.7 2,609,050 + DVU2497 0.59 -1.0 2,609,050 + DVU2497 0.59 -0.2 2,609,058 - DVU2497 0.60 +0.0 2,609,058 - DVU2497 0.60 -0.6 2,609,109 + DVU2497 0.67 +1.0 2,609,145 - DVU2497 0.72 -0.4 2,609,244 + DVU2497 0.85 -0.2 2,609,353 - -0.2
Or see this region's nucleotide sequence