Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2436 and DVU2437 are separated by 77 nucleotides DVU2437 and DVU2438 are separated by 0 nucleotides
DVU2436: DVU2436 - conserved hypothetical protein (TIGR), at 2,540,394 to 2,541,026
DVU2436
DVU2437: DVU2437 - ABC transporter, permease protein (TIGR), at 2,541,104 to 2,542,324
DVU2437
DVU2438: DVU2438 - ABC transporter, ATP-binding protein, authentic frameshift (TIGR), at 2,542,325 to 2,544,687
DVU2438
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2540.279 kb on - strand at 2540.338 kb on + strand at 2540.338 kb on + strand at 2540.346 kb on - strand at 2540.346 kb on - strand at 2540.386 kb on - strand at 2540.392 kb on + strand at 2540.480 kb on - strand, within DVU2436 at 2540.528 kb on - strand, within DVU2436 at 2540.556 kb on + strand, within DVU2436 at 2540.732 kb on - strand, within DVU2436 at 2540.813 kb on - strand, within DVU2436 at 2540.910 kb on + strand, within DVU2436 at 2540.966 kb on - strand at 2540.986 kb on - strand at 2541.106 kb on + strand at 2541.167 kb on - strand at 2541.230 kb on + strand, within DVU2437 at 2541.239 kb on - strand, within DVU2437 at 2541.291 kb on - strand, within DVU2437 at 2541.318 kb on + strand, within DVU2437 at 2541.326 kb on - strand, within DVU2437 at 2541.377 kb on + strand, within DVU2437 at 2541.385 kb on - strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.388 kb on + strand, within DVU2437 at 2541.392 kb on - strand, within DVU2437 at 2541.396 kb on - strand, within DVU2437 at 2541.446 kb on - strand, within DVU2437 at 2541.493 kb on + strand, within DVU2437 at 2541.522 kb on - strand, within DVU2437 at 2541.713 kb on - strand, within DVU2437 at 2541.748 kb on - strand, within DVU2437 at 2541.770 kb on + strand, within DVU2437 at 2541.806 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.927 kb on + strand, within DVU2437 at 2541.935 kb on - strand, within DVU2437 at 2542.018 kb on + strand, within DVU2437 at 2542.027 kb on - strand, within DVU2437 at 2542.083 kb on - strand, within DVU2437 at 2542.202 kb on + strand, within DVU2437 at 2542.227 kb on + strand at 2542.275 kb on + strand at 2542.395 kb on - strand at 2542.744 kb on - strand, within DVU2438 at 2542.765 kb on - strand, within DVU2438 at 2542.862 kb on - strand, within DVU2438 at 2542.923 kb on - strand, within DVU2438 at 2543.047 kb on - strand, within DVU2438 at 2543.067 kb on + strand, within DVU2438 at 2543.067 kb on + strand, within DVU2438 at 2543.168 kb on - strand, within DVU2438 at 2543.168 kb on - strand, within DVU2438 at 2543.298 kb on + strand, within DVU2438
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 2,540,279 - +0.1 2,540,338 + -1.9 2,540,338 + -0.7 2,540,346 - -0.4 2,540,346 - -1.5 2,540,386 - +0.2 2,540,392 + +0.2 2,540,480 - DVU2436 0.14 -0.1 2,540,528 - DVU2436 0.21 +0.5 2,540,556 + DVU2436 0.26 +1.1 2,540,732 - DVU2436 0.53 -0.6 2,540,813 - DVU2436 0.66 -0.7 2,540,910 + DVU2436 0.82 +0.2 2,540,966 - +0.1 2,540,986 - -0.4 2,541,106 + -0.1 2,541,167 - -0.3 2,541,230 + DVU2437 0.10 -0.7 2,541,239 - DVU2437 0.11 -0.5 2,541,291 - DVU2437 0.15 +0.6 2,541,318 + DVU2437 0.18 -0.2 2,541,326 - DVU2437 0.18 -0.2 2,541,377 + DVU2437 0.22 -0.4 2,541,385 - DVU2437 0.23 -1.1 2,541,388 + DVU2437 0.23 -1.6 2,541,388 + DVU2437 0.23 +2.3 2,541,392 - DVU2437 0.24 -1.1 2,541,396 - DVU2437 0.24 -0.4 2,541,446 - DVU2437 0.28 -0.5 2,541,493 + DVU2437 0.32 -0.5 2,541,522 - DVU2437 0.34 -0.1 2,541,713 - DVU2437 0.50 -1.2 2,541,748 - DVU2437 0.53 -2.2 2,541,770 + DVU2437 0.55 -1.0 2,541,806 + DVU2437 0.57 -1.6 2,541,927 + DVU2437 0.67 -0.5 2,541,927 + DVU2437 0.67 +1.5 2,541,935 - DVU2437 0.68 +0.1 2,542,018 + DVU2437 0.75 -1.4 2,542,027 - DVU2437 0.76 -1.8 2,542,083 - DVU2437 0.80 -1.1 2,542,202 + DVU2437 0.90 -0.5 2,542,227 + -0.1 2,542,275 + -2.3 2,542,395 - -0.5 2,542,744 - DVU2438 0.18 -0.0 2,542,765 - DVU2438 0.19 -1.1 2,542,862 - DVU2438 0.23 -0.9 2,542,923 - DVU2438 0.25 -1.1 2,543,047 - DVU2438 0.31 -2.0 2,543,067 + DVU2438 0.31 -0.9 2,543,067 + DVU2438 0.31 -0.4 2,543,168 - DVU2438 0.36 -1.2 2,543,168 - DVU2438 0.36 -1.2 2,543,298 + DVU2438 0.41 -1.2
Or see this region's nucleotide sequence