Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1903

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
1,976,461	-				-0.6
1,976,461	-				-2.2
1,976,510	+		DVU1902	0.14	+0.5
1,976,559	+		DVU1902	0.19	-1.2
1,976,559	-		DVU1902	0.19	-0.3
1,976,586	+		DVU1902	0.22	-0.1
1,976,606	+		DVU1902	0.24	+0.3
1,976,868	+		DVU1902	0.52	-0.5
1,976,902	-		DVU1902	0.55	-0.4
1,976,912	-		DVU1902	0.56	-0.0
1,976,930	+		DVU1902	0.58	+0.8
1,976,982	-		DVU1902	0.64	-0.7
1,977,128	-		DVU1902	0.79	-0.3
1,977,138	-		DVU1902	0.81	+0.2
1,977,141	+		DVU1902	0.81	-0.7
1,977,269	-				-1.4
1,977,269	-				-0.6
1,977,270	-				-0.0
1,977,326	-				+0.5
1,977,418	-				-0.1
1,977,449	-				-0.6
1,977,559	+				-0.3
1,977,604	-				-0.4
1,977,604	-				-0.5
1,977,604	-				-1.0
1,977,621	-				-1.1
1,977,726	+				+0.8
1,977,729	-	mfd	DVU1903	0.10	-0.5
1,977,766	-	mfd	DVU1903	0.11	-1.2
1,977,863	+	mfd	DVU1903	0.14	-1.0
1,977,863	+	mfd	DVU1903	0.14	-0.8
1,978,005	+	mfd	DVU1903	0.18	+0.0
1,978,023	-	mfd	DVU1903	0.18	+0.2
1,978,148	+	mfd	DVU1903	0.22	-1.0
1,978,208	+	mfd	DVU1903	0.24	-0.1
1,978,280	-	mfd	DVU1903	0.26	-1.8
1,978,302	+	mfd	DVU1903	0.27	-0.7
1,978,315	-	mfd	DVU1903	0.27	-0.9
1,978,315	-	mfd	DVU1903	0.27	-0.2
1,978,315	-	mfd	DVU1903	0.27	+0.3
1,978,375	+	mfd	DVU1903	0.29	-1.1
1,978,375	+	mfd	DVU1903	0.29	-1.7
1,978,532	-	mfd	DVU1903	0.33	-1.1
1,978,568	-	mfd	DVU1903	0.34	-0.6
1,978,615	-	mfd	DVU1903	0.35	-1.5
1,978,622	+	mfd	DVU1903	0.36	-0.9
1,978,666	-	mfd	DVU1903	0.37	-1.9
1,978,760	-	mfd	DVU1903	0.40	-0.5
1,978,830	-	mfd	DVU1903	0.42	-0.6
1,978,831	+	mfd	DVU1903	0.42	-0.8
1,978,851	+	mfd	DVU1903	0.42	+0.5
1,978,861	+	mfd	DVU1903	0.43	-0.6
1,978,861	+	mfd	DVU1903	0.43	-2.0
1,978,934	-	mfd	DVU1903	0.45	-0.3
1,978,975	+	mfd	DVU1903	0.46	-0.1
1,979,033	-	mfd	DVU1903	0.47	-0.5
1,979,033	-	mfd	DVU1903	0.47	-0.6
1,979,080	+	mfd	DVU1903	0.49	-0.2
1,979,080	+	mfd	DVU1903	0.49	-0.5
1,979,080	+	mfd	DVU1903	0.49	-1.2
1,979,081	+	mfd	DVU1903	0.49	+0.2
1,979,088	-	mfd	DVU1903	0.49	+0.4
1,979,089	-	mfd	DVU1903	0.49	-0.9
1,979,089	-	mfd	DVU1903	0.49	-0.9
1,979,207	+	mfd	DVU1903	0.52	+0.3
1,979,251	-	mfd	DVU1903	0.54	+0.4
1,979,251	-	mfd	DVU1903	0.54	-0.5
1,979,251	-	mfd	DVU1903	0.54	-0.5
1,979,325	+	mfd	DVU1903	0.56	+0.3
1,979,334	+	mfd	DVU1903	0.56	-0.6
1,979,456	+	mfd	DVU1903	0.60	-2.8
1,979,464	-	mfd	DVU1903	0.60	+1.7
1,979,464	-	mfd	DVU1903	0.60	+0.3
1,979,524	+	mfd	DVU1903	0.62	-0.3
1,979,549	-	mfd	DVU1903	0.62	-1.1
1,979,572	-	mfd	DVU1903	0.63	-0.4
1,979,585	+	mfd	DVU1903	0.63	-0.5
1,979,649	+	mfd	DVU1903	0.65	-0.6
1,979,657	-	mfd	DVU1903	0.65	-1.0
1,979,672	+	mfd	DVU1903	0.66	-0.3
1,979,734	-	mfd	DVU1903	0.68	-2.1
1,979,746	+	mfd	DVU1903	0.68	-0.7
1,979,754	-	mfd	DVU1903	0.68	-2.4
1,979,770	+	mfd	DVU1903	0.69	-0.3
1,979,770	+	mfd	DVU1903	0.69	+0.8
1,979,778	-	mfd	DVU1903	0.69	-0.5
1,979,778	-	mfd	DVU1903	0.69	-1.4
1,979,821	+	mfd	DVU1903	0.70	-1.2
1,979,829	-	mfd	DVU1903	0.70	-0.5
1,979,829	-	mfd	DVU1903	0.70	-0.3
1,979,891	-	mfd	DVU1903	0.72	-3.1
1,979,891	-	mfd	DVU1903	0.72	-0.1
1,979,891	-	mfd	DVU1903	0.72	-0.8
1,979,973	-	mfd	DVU1903	0.74	-1.0
1,980,082	-	mfd	DVU1903	0.78	-0.6
1,980,084	+	mfd	DVU1903	0.78	+0.0
1,980,102	-	mfd	DVU1903	0.78	+0.3
1,980,104	-	mfd	DVU1903	0.78	-0.2
1,980,295	+	mfd	DVU1903	0.84	-1.8
1,980,388	-	mfd	DVU1903	0.86	-0.8
1,980,526	+				+0.4
1,980,545	-				+1.9
1,980,570	+				-0.2
1,980,572	+				-0.3
1,980,606	+				-0.3
1,980,632	+				-1.7
1,980,668	+				-1.2
1,980,676	-				-0.1
1,980,766	-				+0.4
1,980,810	+				-1.4
1,980,861	-				+0.1
1,981,031	+	cheW-2	DVU1904	0.19	-0.2
1,981,075	-	cheW-2	DVU1904	0.28	-0.6
1,981,093	-	cheW-2	DVU1904	0.32	-0.9
1,981,107	+	cheW-2	DVU1904	0.35	+0.2
1,981,199	+	cheW-2	DVU1904	0.54	-0.4
1,981,237	-	cheW-2	DVU1904	0.62	-2.0
1,981,287	-	cheW-2	DVU1904	0.73	-0.0
1,981,347	+	cheW-2	DVU1904	0.85	+0.5
1,981,399	+				-1.0
1,981,399	+				+0.4
1,981,399	+				-1.1
1,981,418	+				-0.4
1,981,426	-				+0.2
1,981,426	-				-2.2
1,981,492	-				+0.4
1,981,496	+				-0.0
1,981,547	+				+0.5
1,981,550	-				-3.0
1,981,677	-		DVU1905	0.16	-1.0
1,981,846	+				-0.0