Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0972 and DVU0973 overlap by 4 nucleotides DVU0973 and DVU0974 are separated by 98 nucleotides DVU0974 and DVU0975 are separated by 32 nucleotides
DVU0972: DVU0972 - HD domain protein (TIGR), at 1,068,370 to 1,069,635
DVU0972
DVU0973: DVU0973 - 4-hydroxybenzoate octaprenyltransferase, putative (TIGR), at 1,069,632 to 1,070,501
DVU0973
DVU0974: DVU0974 - hypothetical protein (TIGR), at 1,070,600 to 1,070,938
DVU0974
DVU0975: DVU0975 - conserved hypothetical protein (TIGR), at 1,070,971 to 1,071,531
DVU0975
Position (kb)
1069
1070
1071 Strain fitness (log2 ratio)
-1
0
1 at 1068.687 kb on + strand, within DVU0972 at 1068.695 kb on - strand, within DVU0972 at 1068.767 kb on + strand, within DVU0972 at 1068.767 kb on + strand, within DVU0972 at 1068.783 kb on - strand, within DVU0972 at 1068.858 kb on - strand, within DVU0972 at 1068.860 kb on + strand, within DVU0972 at 1068.948 kb on - strand, within DVU0972 at 1068.948 kb on - strand, within DVU0972 at 1069.105 kb on + strand, within DVU0972 at 1069.214 kb on + strand, within DVU0972 at 1069.372 kb on - strand, within DVU0972 at 1069.374 kb on - strand, within DVU0972 at 1069.605 kb on - strand at 1069.620 kb on + strand at 1070.405 kb on + strand, within DVU0973 at 1070.552 kb on + strand at 1070.607 kb on + strand at 1070.615 kb on - strand at 1070.655 kb on - strand, within DVU0974 at 1070.896 kb on + strand, within DVU0974 at 1070.897 kb on - strand, within DVU0974 at 1071.027 kb on - strand, within DVU0975 at 1071.066 kb on - strand, within DVU0975 at 1071.122 kb on + strand, within DVU0975 at 1071.122 kb on + strand, within DVU0975 at 1071.414 kb on + strand, within DVU0975
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 1,068,687 + DVU0972 0.25 -0.4 1,068,695 - DVU0972 0.26 -0.5 1,068,767 + DVU0972 0.31 +1.6 1,068,767 + DVU0972 0.31 -1.0 1,068,783 - DVU0972 0.33 -0.7 1,068,858 - DVU0972 0.39 +0.3 1,068,860 + DVU0972 0.39 -0.2 1,068,948 - DVU0972 0.46 -0.9 1,068,948 - DVU0972 0.46 +1.2 1,069,105 + DVU0972 0.58 -0.4 1,069,214 + DVU0972 0.67 -0.6 1,069,372 - DVU0972 0.79 +0.3 1,069,374 - DVU0972 0.79 -0.8 1,069,605 - -0.1 1,069,620 + +0.8 1,070,405 + DVU0973 0.89 -1.7 1,070,552 + +0.6 1,070,607 + -0.4 1,070,615 - -0.7 1,070,655 - DVU0974 0.16 -0.5 1,070,896 + DVU0974 0.87 +0.1 1,070,897 - DVU0974 0.88 +0.3 1,071,027 - DVU0975 0.10 +0.1 1,071,066 - DVU0975 0.17 -0.9 1,071,122 + DVU0975 0.27 -0.6 1,071,122 + DVU0975 0.27 +1.0 1,071,414 + DVU0975 0.79 +0.1
Or see this region's nucleotide sequence