Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt cobI and DVU0647 are separated by 1 nucleotides DVU0647 and fepC overlap by 23 nucleotides fepC and DVU0649 overlap by 4 nucleotides
DVU0646: cobI - precorrin-2 C20-methyltransferase (TIGR), at 717,068 to 717,838
cobI
DVU0647: DVU0647 - iron compound ABC transporter, periplasmic iron compount-binding protein, putative (TIGR), at 717,840 to 718,754
DVU0647
DVU0648: fepC - iron compound ABC transporter, ATP-binding protein (TIGR), at 718,732 to 719,547
fepC
DVU0649: DVU0649 - iron compound ABC transporter, permease protein (TIGR), at 719,544 to 720,599
DVU0649
Position (kb) 718
719
720 Strain fitness (log2 ratio) -2
-1
0
1 at 717.758 kb on - strand, within cobI at 717.761 kb on + strand, within cobI at 717.763 kb on - strand at 717.769 kb on - strand at 717.925 kb on + strand at 717.977 kb on - strand, within DVU0647 at 718.134 kb on - strand, within DVU0647 at 718.134 kb on - strand, within DVU0647 at 718.134 kb on - strand, within DVU0647 at 718.297 kb on + strand, within DVU0647 at 718.307 kb on - strand, within DVU0647 at 718.381 kb on + strand, within DVU0647 at 718.405 kb on + strand, within DVU0647 at 718.413 kb on - strand, within DVU0647 at 718.413 kb on - strand, within DVU0647 at 718.516 kb on + strand, within DVU0647 at 718.542 kb on + strand, within DVU0647 at 718.611 kb on + strand, within DVU0647 at 718.711 kb on + strand at 718.737 kb on - strand at 718.744 kb on + strand at 718.746 kb on + strand at 718.746 kb on + strand at 718.754 kb on - strand at 718.754 kb on - strand at 718.779 kb on + strand at 718.782 kb on - strand at 718.871 kb on + strand, within fepC at 718.889 kb on + strand, within fepC at 718.912 kb on - strand, within fepC at 718.934 kb on + strand, within fepC at 718.939 kb on + strand, within fepC at 718.947 kb on - strand, within fepC at 718.947 kb on - strand, within fepC at 719.020 kb on + strand, within fepC at 719.021 kb on - strand, within fepC at 719.054 kb on - strand, within fepC at 719.145 kb on - strand, within fepC at 719.265 kb on + strand, within fepC at 719.439 kb on + strand, within fepC at 719.630 kb on + strand at 719.630 kb on + strand at 719.638 kb on - strand at 719.638 kb on - strand at 719.734 kb on - strand, within DVU0649 at 719.778 kb on + strand, within DVU0649 at 719.820 kb on - strand, within DVU0649 at 719.847 kb on + strand, within DVU0649 at 720.225 kb on + strand, within DVU0649 at 720.237 kb on + strand, within DVU0649 at 720.248 kb on + strand, within DVU0649 at 720.250 kb on - strand, within DVU0649 at 720.250 kb on - strand, within DVU0649 at 720.251 kb on - strand, within DVU0649 at 720.251 kb on - strand, within DVU0649 at 720.251 kb on - strand, within DVU0649 at 720.363 kb on - strand, within DVU0649 at 720.396 kb on - strand, within DVU0649 at 720.475 kb on - strand, within DVU0649 at 720.477 kb on + strand, within DVU0649 at 720.494 kb on + strand at 720.502 kb on - strand at 720.522 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 717,758 - cobI DVU0646 0.89 -0.9 717,761 + cobI DVU0646 0.90 -0.3 717,763 - +0.1 717,769 - -1.7 717,925 + +0.2 717,977 - DVU0647 0.15 -2.3 718,134 - DVU0647 0.32 -2.0 718,134 - DVU0647 0.32 -1.8 718,134 - DVU0647 0.32 -0.7 718,297 + DVU0647 0.50 -0.1 718,307 - DVU0647 0.51 -2.6 718,381 + DVU0647 0.59 -0.6 718,405 + DVU0647 0.62 +0.5 718,413 - DVU0647 0.63 -2.0 718,413 - DVU0647 0.63 +0.4 718,516 + DVU0647 0.74 +0.4 718,542 + DVU0647 0.77 +0.1 718,611 + DVU0647 0.84 -0.4 718,711 + -1.0 718,737 - -0.9 718,744 + +0.2 718,746 + -0.3 718,746 + -0.9 718,754 - -2.4 718,754 - +0.1 718,779 + -2.3 718,782 - -0.1 718,871 + fepC DVU0648 0.17 -0.2 718,889 + fepC DVU0648 0.19 +0.3 718,912 - fepC DVU0648 0.22 -1.7 718,934 + fepC DVU0648 0.25 -1.3 718,939 + fepC DVU0648 0.25 -1.3 718,947 - fepC DVU0648 0.26 +0.0 718,947 - fepC DVU0648 0.26 -0.6 719,020 + fepC DVU0648 0.35 -0.0 719,021 - fepC DVU0648 0.35 -2.5 719,054 - fepC DVU0648 0.39 -2.5 719,145 - fepC DVU0648 0.51 -1.1 719,265 + fepC DVU0648 0.65 +0.2 719,439 + fepC DVU0648 0.87 -0.6 719,630 + -0.0 719,630 + -1.1 719,638 - -1.7 719,638 - -0.6 719,734 - DVU0649 0.18 -0.7 719,778 + DVU0649 0.22 +1.2 719,820 - DVU0649 0.26 -0.7 719,847 + DVU0649 0.29 -1.0 720,225 + DVU0649 0.64 -0.1 720,237 + DVU0649 0.66 +0.1 720,248 + DVU0649 0.67 +1.0 720,250 - DVU0649 0.67 -0.8 720,250 - DVU0649 0.67 +0.3 720,251 - DVU0649 0.67 -1.7 720,251 - DVU0649 0.67 -0.5 720,251 - DVU0649 0.67 -1.2 720,363 - DVU0649 0.78 -0.7 720,396 - DVU0649 0.81 +0.5 720,475 - DVU0649 0.88 -0.4 720,477 + DVU0649 0.88 +0.3 720,494 + -1.2 720,502 - -0.3 720,522 + +0.1
Or see this region's nucleotide sequence