Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0045 and DVUA0046 overlap by 4 nucleotides DVUA0046 and DVUA0047 are separated by 75 nucleotides
DVUA0045: DVUA0045 - aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR), at 53,852 to 55,468
DVUA0045
DVUA0046: DVUA0046 - glycosyl transferase, group 2 family protein (TIGR), at 55,465 to 56,913
DVUA0046
DVUA0047: DVUA0047 - hypothetical protein (TIGR), at 56,989 to 58,305
DVUA0047
Position (kb) 55
56
57 Strain fitness (log2 ratio) -1
0
1
2 at 54.566 kb on + strand, within DVUA0045 at 54.566 kb on + strand, within DVUA0045 at 54.579 kb on - strand, within DVUA0045 at 54.667 kb on + strand, within DVUA0045 at 54.685 kb on - strand, within DVUA0045 at 54.735 kb on + strand, within DVUA0045 at 54.745 kb on + strand, within DVUA0045 at 54.745 kb on + strand, within DVUA0045 at 54.753 kb on - strand, within DVUA0045 at 54.753 kb on - strand, within DVUA0045 at 54.753 kb on - strand, within DVUA0045 at 54.753 kb on - strand, within DVUA0045 at 54.758 kb on - strand, within DVUA0045 at 54.768 kb on - strand, within DVUA0045 at 54.824 kb on + strand, within DVUA0045 at 54.826 kb on + strand, within DVUA0045 at 54.834 kb on - strand, within DVUA0045 at 54.904 kb on - strand, within DVUA0045 at 55.016 kb on + strand, within DVUA0045 at 55.149 kb on - strand, within DVUA0045 at 55.149 kb on - strand, within DVUA0045 at 55.149 kb on - strand, within DVUA0045 at 55.149 kb on - strand, within DVUA0045 at 55.198 kb on + strand, within DVUA0045 at 55.199 kb on + strand, within DVUA0045 at 55.501 kb on + strand at 55.642 kb on + strand, within DVUA0046 at 55.642 kb on + strand, within DVUA0046 at 55.665 kb on - strand, within DVUA0046 at 55.665 kb on - strand, within DVUA0046 at 55.665 kb on - strand, within DVUA0046 at 55.729 kb on + strand, within DVUA0046 at 55.749 kb on - strand, within DVUA0046 at 55.751 kb on + strand, within DVUA0046 at 55.829 kb on + strand, within DVUA0046 at 55.841 kb on + strand, within DVUA0046 at 55.849 kb on - strand, within DVUA0046 at 55.849 kb on - strand, within DVUA0046 at 55.981 kb on + strand, within DVUA0046 at 56.025 kb on + strand, within DVUA0046 at 56.162 kb on + strand, within DVUA0046 at 56.170 kb on - strand, within DVUA0046 at 56.229 kb on - strand, within DVUA0046 at 56.274 kb on + strand, within DVUA0046 at 56.274 kb on + strand, within DVUA0046 at 56.279 kb on + strand, within DVUA0046 at 56.279 kb on + strand, within DVUA0046 at 56.282 kb on + strand, within DVUA0046 at 56.356 kb on + strand, within DVUA0046 at 56.397 kb on + strand, within DVUA0046 at 56.635 kb on + strand, within DVUA0046 at 56.635 kb on + strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.643 kb on - strand, within DVUA0046 at 56.689 kb on - strand, within DVUA0046 at 56.710 kb on + strand, within DVUA0046 at 56.785 kb on + strand at 56.785 kb on + strand at 56.823 kb on - strand at 56.823 kb on - strand at 56.890 kb on - strand at 56.971 kb on + strand at 57.230 kb on - strand, within DVUA0047 at 57.299 kb on - strand, within DVUA0047 at 57.526 kb on + strand, within DVUA0047 at 57.526 kb on + strand, within DVUA0047 at 57.562 kb on - strand, within DVUA0047 at 57.563 kb on - strand, within DVUA0047 at 57.611 kb on + strand, within DVUA0047 at 57.631 kb on + strand, within DVUA0047 at 57.736 kb on - strand, within DVUA0047 at 57.836 kb on - strand, within DVUA0047 at 57.853 kb on - strand, within DVUA0047 at 57.897 kb on - strand, within DVUA0047 at 57.897 kb on - strand, within DVUA0047
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 10% remove 54,566 + DVUA0045 0.44 +0.0 54,566 + DVUA0045 0.44 -0.6 54,579 - DVUA0045 0.45 +0.1 54,667 + DVUA0045 0.50 -0.2 54,685 - DVUA0045 0.52 +0.3 54,735 + DVUA0045 0.55 +0.9 54,745 + DVUA0045 0.55 -0.5 54,745 + DVUA0045 0.55 -0.5 54,753 - DVUA0045 0.56 +0.5 54,753 - DVUA0045 0.56 +0.6 54,753 - DVUA0045 0.56 -0.6 54,753 - DVUA0045 0.56 +0.4 54,758 - DVUA0045 0.56 +0.7 54,768 - DVUA0045 0.57 -0.3 54,824 + DVUA0045 0.60 -1.2 54,826 + DVUA0045 0.60 +0.2 54,834 - DVUA0045 0.61 -1.7 54,904 - DVUA0045 0.65 -0.8 55,016 + DVUA0045 0.72 -0.2 55,149 - DVUA0045 0.80 +0.2 55,149 - DVUA0045 0.80 +0.1 55,149 - DVUA0045 0.80 +0.1 55,149 - DVUA0045 0.80 +0.5 55,198 + DVUA0045 0.83 -1.0 55,199 + DVUA0045 0.83 -0.5 55,501 + -1.0 55,642 + DVUA0046 0.12 -0.5 55,642 + DVUA0046 0.12 -0.9 55,665 - DVUA0046 0.14 -1.3 55,665 - DVUA0046 0.14 +0.3 55,665 - DVUA0046 0.14 +1.6 55,729 + DVUA0046 0.18 -0.4 55,749 - DVUA0046 0.20 -0.6 55,751 + DVUA0046 0.20 -0.0 55,829 + DVUA0046 0.25 +1.1 55,841 + DVUA0046 0.26 +0.4 55,849 - DVUA0046 0.27 +1.6 55,849 - DVUA0046 0.27 -0.0 55,981 + DVUA0046 0.36 +0.2 56,025 + DVUA0046 0.39 +1.0 56,162 + DVUA0046 0.48 -1.2 56,170 - DVUA0046 0.49 -0.5 56,229 - DVUA0046 0.53 -0.3 56,274 + DVUA0046 0.56 -0.7 56,274 + DVUA0046 0.56 -0.2 56,279 + DVUA0046 0.56 -0.3 56,279 + DVUA0046 0.56 +0.1 56,282 + DVUA0046 0.56 -0.6 56,356 + DVUA0046 0.61 -0.0 56,397 + DVUA0046 0.64 +0.4 56,635 + DVUA0046 0.81 +2.1 56,635 + DVUA0046 0.81 -0.2 56,643 - DVUA0046 0.81 -0.1 56,643 - DVUA0046 0.81 +0.6 56,643 - DVUA0046 0.81 -0.2 56,689 - DVUA0046 0.84 +2.1 56,710 + DVUA0046 0.86 -0.0 56,785 + -0.2 56,785 + -0.2 56,823 - -0.4 56,823 - -0.8 56,890 - -0.3 56,971 + +0.9 57,230 - DVUA0047 0.18 -0.5 57,299 - DVUA0047 0.24 +0.9 57,526 + DVUA0047 0.41 +2.1 57,526 + DVUA0047 0.41 -0.4 57,562 - DVUA0047 0.44 -0.2 57,563 - DVUA0047 0.44 -0.1 57,611 + DVUA0047 0.47 -0.1 57,631 + DVUA0047 0.49 -0.8 57,736 - DVUA0047 0.57 +0.4 57,836 - DVUA0047 0.64 -0.8 57,853 - DVUA0047 0.66 -1.2 57,897 - DVUA0047 0.69 -0.4 57,897 - DVUA0047 0.69 +0.3
Or see this region's nucleotide sequence