Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0070

Experiment: MoYLS4 with DMSO 10%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 10%
84,701	-		DVU0069	0.78	-0.8
84,713	-		DVU0069	0.78	-0.2
84,723	-		DVU0069	0.79	-0.3
84,828	-		DVU0069	0.81	+0.0
84,852	+		DVU0069	0.81	+0.6
84,859	-		DVU0069	0.82	-0.5
84,864	+		DVU0069	0.82	-0.2
84,867	-		DVU0069	0.82	-1.7
84,911	+		DVU0069	0.83	-1.5
84,956	-		DVU0069	0.84	-2.2
84,956	-		DVU0069	0.84	-1.0
84,973	-		DVU0069	0.84	-1.0
85,072	-		DVU0069	0.86	-0.9
85,086	-		DVU0069	0.87	-1.9
85,086	-		DVU0069	0.87	+0.3
85,097	-		DVU0069	0.87	-0.5
85,106	+		DVU0069	0.87	+0.6
85,112	+		DVU0069	0.87	-0.2
85,133	-		DVU0069	0.88	-3.3
85,133	-		DVU0069	0.88	+1.4
85,208	+		DVU0069	0.90	-0.1
85,216	-		DVU0069	0.90	-1.9
85,216	-		DVU0069	0.90	-1.8
85,223	-		DVU0069	0.90	-1.0
85,274	+				-1.4
85,274	+				-0.3
85,274	+				-0.4
85,282	-				+0.1
85,282	-				-0.3
85,286	+				-0.2
85,286	+				-0.5
85,286	+				-1.6
85,294	+				-0.8
85,294	-				-0.4
85,294	-				-1.0
85,311	+				-0.3
85,337	+				-0.1
85,337	+				+0.2
85,337	+				+0.0
85,345	-				-0.7
85,412	-				+1.0
85,436	-				-0.4
85,461	+				-2.3
85,463	+				-0.5
85,471	-				-1.5
85,484	+				+0.2
85,685	-				-1.1
85,685	-				+0.2
85,697	-				-1.4
85,879	-	yhaO	DVU0070	0.16	+1.0
85,881	-	yhaO	DVU0070	0.16	-2.1
85,922	-	yhaO	DVU0070	0.19	-0.7
85,923	+	yhaO	DVU0070	0.19	-2.5
85,929	-	yhaO	DVU0070	0.19	+0.5
85,929	-	yhaO	DVU0070	0.19	-1.0
86,030	-	yhaO	DVU0070	0.27	-0.6
86,074	+	yhaO	DVU0070	0.30	-0.4
86,091	+	yhaO	DVU0070	0.31	-2.8
86,091	+	yhaO	DVU0070	0.31	-0.2
86,098	+	yhaO	DVU0070	0.32	-0.0
86,249	-	yhaO	DVU0070	0.43	-1.0
86,319	+	yhaO	DVU0070	0.48	-1.1
86,356	+	yhaO	DVU0070	0.51	-2.1
86,418	+	yhaO	DVU0070	0.55	-0.6
86,430	-	yhaO	DVU0070	0.56	-0.3
86,436	-	yhaO	DVU0070	0.57	-0.8
86,464	+	yhaO	DVU0070	0.59	+0.3
86,464	+	yhaO	DVU0070	0.59	-0.9
86,472	-	yhaO	DVU0070	0.59	+0.3
86,474	+	yhaO	DVU0070	0.60	-2.6
86,528	+	yhaO	DVU0070	0.64	+0.1
86,529	-	yhaO	DVU0070	0.64	-0.6
86,536	-	yhaO	DVU0070	0.64	-1.0
86,637	-	yhaO	DVU0070	0.72	-0.3
86,732	+	yhaO	DVU0070	0.79	-2.5
86,791	+	yhaO	DVU0070	0.83	-0.4
86,838	-	yhaO	DVU0070	0.86	-1.4
86,873	+	yhaO	DVU0070	0.89	-0.5
86,886	-				-2.0
86,891	-				-1.9
86,920	+				-2.2
86,920	+				-0.2
86,928	-				-0.5
86,928	-				+0.1
86,928	-				-2.8
86,928	-				+0.0
86,981	+				-1.2
86,996	-				-0.6
87,000	+				-1.2
87,001	+				-0.3
87,008	+				-0.4
87,093	+				-0.4
87,106	-				-0.4
87,111	-				+0.0
87,135	+				-0.3
87,206	-				-0.7
87,225	+				-0.6
87,225	+				+0.1
87,225	+				-2.1
87,268	+				+0.3
87,286	+				+0.8
87,301	+				+0.5
87,311	+				+1.2
87,330	-				-0.0
87,332	+				-0.9
87,337	+				+0.0
87,391	+				+0.6
87,391	+				-0.1
87,391	+				-0.2
87,391	+				-0.7
87,391	+				-1.6
87,391	+				-0.7
87,391	+				+0.5
87,399	-				-0.9
87,399	-				+0.2
87,402	+				+1.1
87,411	+				-0.3
87,436	-				+2.1
87,466	-				+0.0
87,466	-				+0.4
87,492	-				-1.2
87,495	+				+0.1
87,530	-				-0.2
87,536	+				-0.9
87,544	-				-0.6
87,596	-				-0.2
87,639	+				-0.4
87,670	+	dinP	DVU0071	0.11	+0.0
87,672	+	dinP	DVU0071	0.11	+0.7
87,672	+	dinP	DVU0071	0.11	-0.2
87,672	+	dinP	DVU0071	0.11	+0.5
87,678	-	dinP	DVU0071	0.12	+0.4
87,680	-	dinP	DVU0071	0.12	+0.4
87,680	-	dinP	DVU0071	0.12	+0.0
87,701	-	dinP	DVU0071	0.14	-0.3
87,707	-	dinP	DVU0071	0.14	-0.4
87,783	+	dinP	DVU0071	0.21	+0.0
87,786	-	dinP	DVU0071	0.21	+1.2
87,796	-	dinP	DVU0071	0.22	-1.3
87,820	+	dinP	DVU0071	0.24	-0.2
87,828	-	dinP	DVU0071	0.25	-0.4
87,854	+	dinP	DVU0071	0.27	+0.4
87,862	-	dinP	DVU0071	0.28	-3.3
87,878	+	dinP	DVU0071	0.29	-0.3
87,890	+	dinP	DVU0071	0.30	-0.6
87,905	+	dinP	DVU0071	0.32	-1.4
87,906	-	dinP	DVU0071	0.32	-0.6
87,937	-	dinP	DVU0071	0.34	-0.4
87,942	-	dinP	DVU0071	0.35	-0.4
87,944	-	dinP	DVU0071	0.35	+0.2
87,964	-	dinP	DVU0071	0.37	-0.5
88,008	+	dinP	DVU0071	0.40	-0.9