Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1247
Experiment: MoYLS4 with DMSO 10%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with DMSO 10% |
---|---|---|---|---|---|
remove | |||||
1,332,151 | - | DVU1245 | 0.82 | -2.7 | |
1,332,278 | - | -0.0 | |||
1,332,401 | + | DVU1246 | 0.11 | +0.1 | |
1,332,432 | + | DVU1246 | 0.15 | -2.3 | |
1,332,578 | + | DVU1246 | 0.33 | +0.9 | |
1,332,586 | + | DVU1246 | 0.34 | +0.3 | |
1,332,694 | + | DVU1246 | 0.47 | -0.4 | |
1,332,760 | - | DVU1246 | 0.56 | -0.9 | |
1,332,849 | + | DVU1246 | 0.67 | -1.0 | |
1,333,080 | - | -0.3 | |||
1,333,177 | - | -2.8 | |||
1,333,184 | - | -0.4 | |||
1,333,184 | - | +0.4 | |||
1,333,241 | + | DVU1247 | 0.11 | +0.4 | |
1,333,243 | + | DVU1247 | 0.12 | +0.9 | |
1,333,282 | + | DVU1247 | 0.16 | -0.4 | |
1,333,476 | + | DVU1247 | 0.40 | +0.6 | |
1,333,494 | + | DVU1247 | 0.42 | -0.2 | |
1,333,781 | - | DVU1247 | 0.77 | -1.0 | |
1,333,803 | + | DVU1247 | 0.80 | +0.9 | |
1,333,859 | - | DVU1247 | 0.86 | +1.3 | |
1,333,924 | - | +0.6 |
Or see this region's nucleotide sequence