Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1991

Experiment: MoYLS4 with Cefoxitin 5ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Cefoxitin 5ug/mL
2,069,270	+		DVU1990	0.45	-0.2
2,069,289	+		DVU1990	0.48	-0.5
2,069,291	+		DVU1990	0.48	-0.8
2,069,315	-		DVU1990	0.52	+1.0
2,069,400	-		DVU1990	0.65	-1.5
2,069,402	+		DVU1990	0.65	-0.1
2,069,422	+		DVU1990	0.68	-0.3
2,069,422	+		DVU1990	0.68	-0.2
2,069,441	+		DVU1990	0.71	+0.7
2,069,488	-		DVU1990	0.78	+1.1
2,069,490	+		DVU1990	0.79	+0.0
2,069,515	-		DVU1990	0.83	-1.4
2,069,519	+		DVU1990	0.83	+0.2
2,069,594	+				+0.9
2,069,614	-				-1.6
2,069,624	-				-0.6
2,069,633	+				+1.3
2,069,646	-				-0.9
2,069,669	+				-1.3
2,069,872	-				+0.1
2,069,878	-				-0.1
2,070,008	+				-0.1
2,070,071	-				-1.2
2,070,142	+				-0.0
2,070,142	+				+0.6
2,070,212	-				-0.2
2,070,212	-				-0.4
2,070,229	-				-1.0
2,070,343	+		DVU1991	0.12	-0.5
2,070,387	+		DVU1991	0.16	-0.0
2,070,588	+		DVU1991	0.37	+0.2
2,070,611	+		DVU1991	0.39	-1.4
2,070,636	-		DVU1991	0.41	-1.1
2,070,646	-		DVU1991	0.42	-0.4
2,070,680	+		DVU1991	0.46	+0.1
2,070,762	-		DVU1991	0.54	-1.9
2,070,772	-		DVU1991	0.55	-0.3
2,070,900	-		DVU1991	0.68	-0.5
2,070,946	+		DVU1991	0.72	-0.6
2,070,954	-		DVU1991	0.73	-0.3
2,071,137	+				-0.1
2,071,211	-				+0.1
2,071,297	+				-0.0
2,071,305	-				+0.2
2,071,315	-				+0.2
2,071,333	-				-0.9
2,071,334	-				-0.7
2,071,406	-				+0.3
2,071,440	-				+0.7
2,071,612	-	cat	DVU1992	0.29	+0.1
2,071,617	-	cat	DVU1992	0.30	-0.5
2,071,630	+	cat	DVU1992	0.32	-0.8
2,071,638	-	cat	DVU1992	0.33	-0.1
2,071,650	+	cat	DVU1992	0.35	-0.0
2,071,800	+	cat	DVU1992	0.59	-0.4
2,071,806	+	cat	DVU1992	0.60	-0.2
2,071,990	+	cat	DVU1992	0.88	-0.8
2,071,998	-	cat	DVU1992	0.89	+0.9
2,071,998	-	cat	DVU1992	0.89	+0.3
2,072,046	+				-0.4
2,072,052	-				-0.9
2,072,058	+				+0.3
2,072,066	-				+0.1
2,072,095	-				+0.8
2,072,191	+				+0.7