Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0505
Experiment: MoYLS4 with Cefoxitin 5ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cefoxitin 5ug/mL |
---|---|---|---|---|---|
remove | |||||
578,039 | + | truB | DVU0505 | 0.36 | -0.9 |
578,061 | - | truB | DVU0505 | 0.38 | -1.3 |
578,252 | - | truB | DVU0505 | 0.59 | -1.1 |
578,270 | - | truB | DVU0505 | 0.61 | -0.6 |
578,339 | + | truB | DVU0505 | 0.69 | -1.5 |
578,389 | - | truB | DVU0505 | 0.74 | -0.5 |
578,401 | + | truB | DVU0505 | 0.75 | -0.2 |
578,423 | - | truB | DVU0505 | 0.78 | +0.7 |
578,436 | + | truB | DVU0505 | 0.79 | +0.3 |
578,534 | - | truB | DVU0505 | 0.90 | -0.1 |
578,580 | + | -0.8 | |||
578,593 | - | -0.4 | |||
578,642 | - | -0.4 | |||
578,654 | - | -0.3 | |||
578,729 | - | -0.3 | |||
578,781 | - | DVU0506 | 0.15 | +0.8 | |
578,846 | + | DVU0506 | 0.21 | +2.1 | |
578,936 | - | DVU0506 | 0.30 | -0.3 | |
579,160 | + | DVU0506 | 0.53 | -0.0 | |
579,224 | + | DVU0506 | 0.59 | -0.0 | |
579,372 | + | DVU0506 | 0.74 | -0.2 | |
579,372 | + | DVU0506 | 0.74 | -0.7 | |
579,388 | + | DVU0506 | 0.76 | -0.6 | |
579,429 | - | DVU0506 | 0.80 | -1.1 | |
579,429 | - | DVU0506 | 0.80 | +1.1 | |
579,429 | - | DVU0506 | 0.80 | +0.9 |
Or see this region's nucleotide sequence