Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0156

Experiment: MoYLS4 with Cefoxitin 5ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Cefoxitin 5ug/mL
191,242	+		DVU0155	0.28	-0.2
191,282	-		DVU0155	0.31	-0.5
191,397	+		DVU0155	0.39	-0.1
191,447	+		DVU0155	0.43	-0.1
191,479	-		DVU0155	0.45	-0.3
191,529	+		DVU0155	0.49	-0.4
191,529	+		DVU0155	0.49	+0.4
191,580	-		DVU0155	0.52	-0.8
191,580	-		DVU0155	0.52	-1.7
191,595	+		DVU0155	0.53	+0.7
191,755	+		DVU0155	0.65	-0.5
191,861	+		DVU0155	0.72	-0.1
191,900	-		DVU0155	0.75	+0.3
191,938	+		DVU0155	0.78	-0.4
191,977	-		DVU0155	0.81	-0.2
191,979	+		DVU0155	0.81	-0.1
191,987	-		DVU0155	0.81	-0.5
192,054	+		DVU0155	0.86	-0.6
192,064	-		DVU0155	0.87	-1.2
192,070	+		DVU0155	0.87	-3.2
192,076	-		DVU0155	0.88	-0.1
192,156	-				-0.7
192,197	+				+0.1
192,197	+				+0.1
192,197	+				-0.1
192,197	+				+0.8
192,205	-				+0.8
192,205	-				-0.1
192,205	-				-0.9
192,205	-				+1.5
192,205	-				-0.5
192,205	-				-1.5
192,205	-				-0.1
192,283	-				+1.0
192,311	+				-0.1
192,369	-				+0.0
192,402	-				-0.2
192,474	+	pcrA	DVU0156	0.11	+0.1
192,474	+	pcrA	DVU0156	0.11	-0.5
192,474	+	pcrA	DVU0156	0.11	-0.9
192,552	-	pcrA	DVU0156	0.14	-0.5
192,575	-	pcrA	DVU0156	0.16	-0.1
192,597	+	pcrA	DVU0156	0.17	-0.9
192,603	-	pcrA	DVU0156	0.17	+0.5
192,605	+	pcrA	DVU0156	0.17	-0.1
192,613	-	pcrA	DVU0156	0.17	+0.2
192,636	+	pcrA	DVU0156	0.18	-0.3
192,643	-	pcrA	DVU0156	0.19	+0.1
192,671	-	pcrA	DVU0156	0.20	-0.5
192,671	-	pcrA	DVU0156	0.20	-0.6
192,714	+	pcrA	DVU0156	0.22	-0.0
192,714	+	pcrA	DVU0156	0.22	+0.3
192,722	-	pcrA	DVU0156	0.22	-0.7
192,771	+	pcrA	DVU0156	0.25	-0.4
192,798	+	pcrA	DVU0156	0.26	-1.1
192,806	-	pcrA	DVU0156	0.26	-0.4
192,849	-	pcrA	DVU0156	0.28	+0.5
192,931	-	pcrA	DVU0156	0.32	-0.4
192,977	+	pcrA	DVU0156	0.34	-0.3
192,985	-	pcrA	DVU0156	0.34	-0.4
193,116	+	pcrA	DVU0156	0.41	-1.1
193,157	+	pcrA	DVU0156	0.42	-0.1
193,172	+	pcrA	DVU0156	0.43	+0.1
193,172	+	pcrA	DVU0156	0.43	-0.4
193,180	-	pcrA	DVU0156	0.44	-1.3
193,188	-	pcrA	DVU0156	0.44	-0.9
193,216	-	pcrA	DVU0156	0.45	-0.3
193,262	+	pcrA	DVU0156	0.47	+0.9
193,279	-	pcrA	DVU0156	0.48	-0.4
193,315	-	pcrA	DVU0156	0.50	-1.4
193,325	+	pcrA	DVU0156	0.50	+0.0
193,448	-	pcrA	DVU0156	0.56	-0.2
193,502	+	pcrA	DVU0156	0.58	-0.9
193,503	-	pcrA	DVU0156	0.58	-1.3
193,510	-	pcrA	DVU0156	0.59	-0.0
193,512	+	pcrA	DVU0156	0.59	-0.6
193,560	+	pcrA	DVU0156	0.61	+0.9
193,560	+	pcrA	DVU0156	0.61	-0.7
193,568	-	pcrA	DVU0156	0.61	-0.7
193,568	-	pcrA	DVU0156	0.61	-0.3
193,568	-	pcrA	DVU0156	0.61	-0.4
193,597	+	pcrA	DVU0156	0.63	-0.3
193,597	+	pcrA	DVU0156	0.63	-0.5
193,605	-	pcrA	DVU0156	0.63	-0.2
193,605	-	pcrA	DVU0156	0.63	-0.7
193,605	-	pcrA	DVU0156	0.63	-0.9
193,640	-	pcrA	DVU0156	0.65	-0.8
193,657	-	pcrA	DVU0156	0.66	-0.2
193,691	+	pcrA	DVU0156	0.67	+0.3
193,726	+	pcrA	DVU0156	0.69	-1.3
193,734	-	pcrA	DVU0156	0.69	-0.3
193,757	-	pcrA	DVU0156	0.70	-1.8
193,758	-	pcrA	DVU0156	0.70	-0.7
193,841	+	pcrA	DVU0156	0.74	-0.3
193,872	-	pcrA	DVU0156	0.76	+0.5
193,904	+	pcrA	DVU0156	0.77	-0.4
193,934	-	pcrA	DVU0156	0.78	-1.1
193,985	-	pcrA	DVU0156	0.81	-0.9
194,031	-	pcrA	DVU0156	0.83	-0.3
194,068	+	pcrA	DVU0156	0.85	-0.7
194,125	-	pcrA	DVU0156	0.87	-1.6
194,282	-				+0.7
194,299	-				-1.4
194,351	+				-0.3
195,379	+				-1.6