Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3116

Experiment: MoYLS4 with Cefoxitin 5ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Cefoxitin 5ug/mL
3,264,232	-				+0.2
3,264,234	+				-0.7
3,264,252	+				-0.6
3,264,260	-				-0.7
3,264,265	-				+0.1
3,264,552	+				-0.4
3,264,557	+				+0.3
3,264,641	-				-0.2
3,264,653	+				-0.5
3,264,658	+				-0.7
3,264,692	+				-0.9
3,264,718	+				+0.3
3,264,804	+	prfC	DVU3116	0.15	+0.4
3,264,830	-	prfC	DVU3116	0.17	+1.5
3,264,848	-	prfC	DVU3116	0.18	-0.5
3,264,918	-	prfC	DVU3116	0.23	-1.9
3,264,942	+	prfC	DVU3116	0.24	+0.0
3,264,946	-	prfC	DVU3116	0.24	-1.2
3,265,007	-	prfC	DVU3116	0.28	-0.4
3,265,084	-	prfC	DVU3116	0.33	-1.1
3,265,101	+	prfC	DVU3116	0.34	-0.3
3,265,109	-	prfC	DVU3116	0.35	-0.6
3,265,119	-	prfC	DVU3116	0.35	+0.5
3,265,151	-	prfC	DVU3116	0.37	-0.3
3,265,234	+	prfC	DVU3116	0.42	-0.5
3,265,235	+	prfC	DVU3116	0.42	-0.7
3,265,242	+	prfC	DVU3116	0.43	-0.3
3,265,250	-	prfC	DVU3116	0.43	-2.2
3,265,250	-	prfC	DVU3116	0.43	-1.2
3,265,250	-	prfC	DVU3116	0.43	-0.7
3,265,250	-	prfC	DVU3116	0.43	-1.2
3,265,252	+	prfC	DVU3116	0.44	-0.1
3,265,291	+	prfC	DVU3116	0.46	-0.7
3,265,469	+	prfC	DVU3116	0.57	-0.9
3,265,483	-	prfC	DVU3116	0.58	-0.7
3,265,569	-	prfC	DVU3116	0.63	-0.5
3,265,570	-	prfC	DVU3116	0.64	-0.4
3,265,575	-	prfC	DVU3116	0.64	-0.2
3,265,779	+	prfC	DVU3116	0.77	-0.2
3,265,799	+	prfC	DVU3116	0.78	-0.7
3,265,857	-	prfC	DVU3116	0.82	-1.0
3,265,881	+	prfC	DVU3116	0.83	-0.9
3,265,929	+	prfC	DVU3116	0.86	-0.9
3,265,989	+	prfC	DVU3116	0.90	-0.8
3,266,243	+				-0.7
3,266,310	+				-0.9
3,266,313	-				+0.3
3,266,326	-				-0.7
3,266,328	+				+0.8
3,266,329	+				+0.2
3,266,339	+				+0.2
3,266,407	-				-0.1
3,266,437	+				+0.1
3,266,445	-				+0.6
3,266,616	+		DVU3117	0.31	-1.2
3,266,858	+		DVU3117	0.73	-0.4
3,266,866	-		DVU3117	0.74	-0.3
3,266,992	+				-0.4
3,266,992	+				-0.1
3,267,000	-				-0.4
3,267,005	+				+0.2
3,267,013	-				-0.3
3,267,080	-				-0.0
3,267,096	+				+0.1
3,267,137	-				-0.3