Experiment: MoYLS4 with Cefoxitin 5ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0767 and murI are separated by 88 nucleotides murI and DVU0769 are separated by 1 nucleotides DVU0769 and DVU0770 are separated by 281 nucleotides
DVU0767: DVU0767 - aminotransferase, class V (TIGR), at 857,778 to 858,884
DVU0767
DVU0768: murI - glutamate racemase (TIGR), at 858,973 to 859,821
murI
DVU0769: DVU0769 - pyridoxal kinase, putative (TIGR), at 859,823 to 860,701
DVU0769
DVU0770: DVU0770 - membrane protein, putative (TIGR), at 860,983 to 861,933
DVU0770
Position (kb) 859
860
861 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 858.842 kb on + strand at 858.850 kb on - strand at 858.871 kb on + strand at 858.871 kb on + strand at 859.955 kb on - strand, within DVU0769 at 859.960 kb on - strand, within DVU0769 at 859.986 kb on + strand, within DVU0769 at 860.107 kb on - strand, within DVU0769 at 860.237 kb on - strand, within DVU0769 at 860.237 kb on - strand, within DVU0769 at 860.274 kb on - strand, within DVU0769 at 860.296 kb on + strand, within DVU0769 at 860.385 kb on - strand, within DVU0769 at 860.577 kb on + strand, within DVU0769 at 860.597 kb on - strand, within DVU0769 at 860.604 kb on - strand, within DVU0769 at 860.639 kb on - strand at 860.684 kb on + strand at 860.686 kb on + strand at 860.692 kb on - strand at 860.711 kb on - strand at 860.711 kb on - strand at 860.804 kb on - strand at 860.840 kb on + strand at 860.848 kb on - strand at 860.848 kb on - strand at 860.941 kb on + strand at 860.967 kb on + strand at 861.052 kb on - strand at 861.108 kb on + strand, within DVU0770 at 861.161 kb on + strand, within DVU0770 at 861.166 kb on + strand, within DVU0770 at 861.179 kb on - strand, within DVU0770 at 861.250 kb on + strand, within DVU0770 at 861.260 kb on - strand, within DVU0770 at 861.323 kb on + strand, within DVU0770 at 861.323 kb on + strand, within DVU0770 at 861.333 kb on + strand, within DVU0770 at 861.363 kb on - strand, within DVU0770 at 861.371 kb on + strand, within DVU0770 at 861.376 kb on + strand, within DVU0770 at 861.378 kb on - strand, within DVU0770 at 861.378 kb on - strand, within DVU0770 at 861.588 kb on + strand, within DVU0770
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cefoxitin 5ug/mL remove 858,842 + -0.3 858,850 - +0.0 858,871 + -0.2 858,871 + -0.4 859,955 - DVU0769 0.15 -1.0 859,960 - DVU0769 0.16 -0.6 859,986 + DVU0769 0.19 -0.3 860,107 - DVU0769 0.32 -0.7 860,237 - DVU0769 0.47 +0.2 860,237 - DVU0769 0.47 -1.4 860,274 - DVU0769 0.51 -1.2 860,296 + DVU0769 0.54 -0.7 860,385 - DVU0769 0.64 -0.1 860,577 + DVU0769 0.86 -0.1 860,597 - DVU0769 0.88 -1.0 860,604 - DVU0769 0.89 -0.5 860,639 - -0.8 860,684 + +0.6 860,686 + +0.0 860,692 - -0.6 860,711 - +0.4 860,711 - -0.3 860,804 - +0.0 860,840 + -0.4 860,848 - +0.0 860,848 - -0.0 860,941 + -0.1 860,967 + +0.5 861,052 - +0.1 861,108 + DVU0770 0.13 +0.1 861,161 + DVU0770 0.19 -2.9 861,166 + DVU0770 0.19 -1.6 861,179 - DVU0770 0.21 +0.1 861,250 + DVU0770 0.28 -0.9 861,260 - DVU0770 0.29 -0.3 861,323 + DVU0770 0.36 -0.4 861,323 + DVU0770 0.36 +0.6 861,333 + DVU0770 0.37 -0.1 861,363 - DVU0770 0.40 +0.1 861,371 + DVU0770 0.41 +0.0 861,376 + DVU0770 0.41 -0.1 861,378 - DVU0770 0.42 +0.1 861,378 - DVU0770 0.42 -0.0 861,588 + DVU0770 0.64 -0.2
Or see this region's nucleotide sequence