Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0706
Experiment: MoYLS4 with Cefoxitin 5ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cefoxitin 5ug/mL | 
|---|---|---|---|---|---|
| remove | |||||
| 785,576 | + | dctM | DVU0705 | 0.38 | -0.1 | 
| 785,740 | - | dctM | DVU0705 | 0.51 | -0.6 | 
| 785,825 | + | dctM | DVU0705 | 0.57 | -0.1 | 
| 785,852 | - | dctM | DVU0705 | 0.59 | -1.4 | 
| 785,904 | + | dctM | DVU0705 | 0.63 | -1.5 | 
| 785,909 | + | dctM | DVU0705 | 0.64 | -1.1 | 
| 785,980 | + | dctM | DVU0705 | 0.69 | +0.7 | 
| 786,081 | + | dctM | DVU0705 | 0.77 | -0.1 | 
| 786,107 | - | dctM | DVU0705 | 0.79 | -0.1 | 
| 786,135 | + | dctM | DVU0705 | 0.81 | -1.2 | 
| 786,171 | + | dctM | DVU0705 | 0.84 | +0.1 | 
| 786,171 | + | dctM | DVU0705 | 0.84 | -0.5 | 
| 786,318 | - | -1.0 | |||
| 786,336 | - | +0.2 | |||
| 786,378 | - | +0.0 | |||
| 786,398 | + | +0.0 | |||
| 786,406 | - | -0.3 | |||
| 786,450 | + | DVU0706 | 0.17 | -0.2 | |
| 786,566 | - | DVU0706 | 0.41 | -0.8 | |
| 786,733 | - | DVU0706 | 0.77 | +1.0 | |
| 786,780 | + | DVU0706 | 0.87 | -0.6 | |
| 786,780 | + | DVU0706 | 0.87 | -0.7 | |
| 786,788 | - | DVU0706 | 0.89 | -1.0 | |
| 786,788 | - | DVU0706 | 0.89 | -0.2 | |
| 786,972 | + | +0.4 | |||
| 787,026 | + | +0.3 | |||
| 787,034 | - | dctP | DVU0707 | 0.11 | +1.0 | 
| 787,049 | - | dctP | DVU0707 | 0.12 | -0.2 | 
| 787,099 | + | dctP | DVU0707 | 0.17 | -1.0 | 
| 787,205 | - | dctP | DVU0707 | 0.27 | -0.1 | 
| 787,212 | - | dctP | DVU0707 | 0.28 | -0.4 | 
| 787,226 | - | dctP | DVU0707 | 0.29 | -0.7 | 
| 787,226 | - | dctP | DVU0707 | 0.29 | +0.6 | 
| 787,244 | + | dctP | DVU0707 | 0.31 | -0.7 | 
| 787,285 | - | dctP | DVU0707 | 0.35 | -0.9 | 
| 787,310 | - | dctP | DVU0707 | 0.38 | -1.6 | 
| 787,310 | - | dctP | DVU0707 | 0.38 | -0.2 | 
| 787,509 | + | dctP | DVU0707 | 0.57 | +0.7 | 
| 787,548 | + | dctP | DVU0707 | 0.61 | +0.1 | 
| 787,575 | + | dctP | DVU0707 | 0.64 | -0.3 | 
| 787,600 | - | dctP | DVU0707 | 0.66 | -0.1 | 
| 787,690 | - | dctP | DVU0707 | 0.75 | +2.6 | 
| 787,690 | - | dctP | DVU0707 | 0.75 | +0.1 | 
| 787,713 | + | dctP | DVU0707 | 0.77 | -0.1 | 
| 787,790 | + | dctP | DVU0707 | 0.85 | +0.4 | 
| 787,836 | + | dctP | DVU0707 | 0.89 | -2.3 | 
Or see this region's nucleotide sequence