Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1147 and DVU1148 are separated by 1 nucleotides DVU1148 and DORF9582 are separated by 593 nucleotides DORF9582 and DORF9585 are separated by 81 nucleotides
DVU1147: DVU1147 - alginate o-acetyltransferase AlgI, putative (TIGR), at 1,241,837 to 1,243,216
DVU1147
DVU1148: DVU1148 - conserved hypothetical protein (TIGR), at 1,243,218 to 1,244,264
DVU1148
DORF9582: DORF9582 - no description, at 1,244,858 to 1,245,076
DORF9582
DORF9585: DORF9585 - no description, at 1,245,158 to 1,245,361
DORF9585
Position (kb) 1243
1244
1245 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1242.331 kb on + strand, within DVU1147 at 1242.331 kb on + strand, within DVU1147 at 1242.331 kb on + strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.417 kb on - strand, within DVU1147 at 1242.500 kb on - strand, within DVU1147 at 1242.560 kb on + strand, within DVU1147 at 1242.574 kb on - strand, within DVU1147 at 1242.592 kb on + strand, within DVU1147 at 1243.437 kb on - strand, within DVU1148 at 1243.444 kb on - strand, within DVU1148 at 1243.627 kb on + strand, within DVU1148 at 1243.822 kb on + strand, within DVU1148 at 1243.832 kb on + strand, within DVU1148 at 1244.160 kb on + strand at 1244.168 kb on - strand at 1244.313 kb on + strand at 1244.340 kb on + strand at 1244.369 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.418 kb on - strand at 1244.457 kb on - strand at 1244.546 kb on + strand at 1244.570 kb on - strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.589 kb on + strand at 1244.589 kb on + strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.597 kb on - strand at 1244.616 kb on - strand at 1244.616 kb on - strand at 1244.638 kb on - strand at 1244.663 kb on - strand at 1244.733 kb on - strand at 1244.833 kb on - strand at 1244.845 kb on + strand at 1244.896 kb on - strand, within DORF9582 at 1244.953 kb on + strand, within DORF9582 at 1244.999 kb on + strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.136 kb on + strand at 1245.210 kb on - strand, within DORF9585
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 1,242,331 + DVU1147 0.36 -2.1 1,242,331 + DVU1147 0.36 -0.6 1,242,331 + DVU1147 0.36 -0.5 1,242,339 - DVU1147 0.36 +0.3 1,242,339 - DVU1147 0.36 -0.9 1,242,339 - DVU1147 0.36 -0.1 1,242,417 - DVU1147 0.42 +0.1 1,242,500 - DVU1147 0.48 -0.5 1,242,560 + DVU1147 0.52 -0.9 1,242,574 - DVU1147 0.53 +0.1 1,242,592 + DVU1147 0.55 -0.1 1,243,437 - DVU1148 0.21 +1.3 1,243,444 - DVU1148 0.22 -0.5 1,243,627 + DVU1148 0.39 -0.0 1,243,822 + DVU1148 0.58 -1.1 1,243,832 + DVU1148 0.59 +2.1 1,244,160 + -0.9 1,244,168 - -0.4 1,244,313 + +0.0 1,244,340 + -1.4 1,244,369 + -0.6 1,244,410 + +0.3 1,244,410 + -0.4 1,244,410 + -0.0 1,244,410 + -1.1 1,244,410 + +1.2 1,244,410 + +1.0 1,244,418 - -0.0 1,244,457 - +0.3 1,244,546 + -0.1 1,244,570 - +0.3 1,244,588 + +0.7 1,244,588 + -1.3 1,244,588 + +0.1 1,244,588 + +1.0 1,244,589 + +0.3 1,244,589 + +0.1 1,244,596 - +0.0 1,244,596 - +1.2 1,244,596 - -0.1 1,244,596 - -2.8 1,244,596 - -1.1 1,244,597 - -1.4 1,244,616 - -0.1 1,244,616 - -0.3 1,244,638 - +0.0 1,244,663 - -0.2 1,244,733 - +0.4 1,244,833 - -0.1 1,244,845 + -0.2 1,244,896 - DORF9582 0.17 -1.4 1,244,953 + DORF9582 0.43 -0.3 1,244,999 + DORF9582 0.64 -0.1 1,245,031 - DORF9582 0.79 -0.0 1,245,031 - DORF9582 0.79 -0.9 1,245,136 + -0.1 1,245,210 - DORF9585 0.25 +0.3
Or see this region's nucleotide sequence