Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0066 and DVUA0067 are separated by 372 nucleotides DVUA0067 and DVUA0068 are separated by 51 nucleotides
DVUA0066: DVUA0066 - phospholipase, patatin family (TIGR), at 85,372 to 86,784
DVUA0066
DVUA0067: DVUA0067 - membrane protein, putative (TIGR), at 87,157 to 88,281
DVUA0067
DVUA0068: DVUA0068 - membrane protein, putative (TIGR), at 88,333 to 90,315
DVUA0068
Position (kb) 87
88
89 Strain fitness (log2 ratio) -2
-1
0
1 at 86.168 kb on + strand, within DVUA0066 at 86.198 kb on + strand, within DVUA0066 at 86.238 kb on + strand, within DVUA0066 at 86.246 kb on - strand, within DVUA0066 at 86.258 kb on + strand, within DVUA0066 at 86.266 kb on - strand, within DVUA0066 at 86.266 kb on - strand, within DVUA0066 at 86.387 kb on + strand, within DVUA0066 at 86.387 kb on + strand, within DVUA0066 at 86.393 kb on + strand, within DVUA0066 at 86.393 kb on + strand, within DVUA0066 at 86.401 kb on - strand, within DVUA0066 at 86.411 kb on - strand, within DVUA0066 at 86.423 kb on + strand, within DVUA0066 at 86.433 kb on + strand, within DVUA0066 at 86.461 kb on + strand, within DVUA0066 at 86.490 kb on - strand, within DVUA0066 at 86.553 kb on + strand, within DVUA0066 at 86.606 kb on + strand, within DVUA0066 at 86.614 kb on - strand, within DVUA0066 at 86.672 kb on - strand at 86.707 kb on + strand at 86.765 kb on - strand at 86.780 kb on - strand at 87.076 kb on - strand at 87.215 kb on - strand at 87.409 kb on + strand, within DVUA0067 at 88.068 kb on + strand, within DVUA0067 at 88.291 kb on - strand at 88.403 kb on + strand at 88.530 kb on + strand at 88.760 kb on + strand, within DVUA0068 at 88.930 kb on + strand, within DVUA0068 at 88.942 kb on - strand, within DVUA0068 at 88.996 kb on + strand, within DVUA0068 at 88.997 kb on - strand, within DVUA0068 at 88.999 kb on - strand, within DVUA0068 at 89.092 kb on + strand, within DVUA0068 at 89.100 kb on - strand, within DVUA0068 at 89.153 kb on + strand, within DVUA0068 at 89.170 kb on + strand, within DVUA0068 at 89.210 kb on + strand, within DVUA0068 at 89.222 kb on + strand, within DVUA0068 at 89.245 kb on + strand, within DVUA0068 at 89.275 kb on + strand, within DVUA0068
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 86,168 + DVUA0066 0.56 -0.2 86,198 + DVUA0066 0.58 -0.9 86,238 + DVUA0066 0.61 -0.3 86,246 - DVUA0066 0.62 +0.1 86,258 + DVUA0066 0.63 -0.2 86,266 - DVUA0066 0.63 -0.0 86,266 - DVUA0066 0.63 -0.1 86,387 + DVUA0066 0.72 -0.6 86,387 + DVUA0066 0.72 +0.0 86,393 + DVUA0066 0.72 -0.3 86,393 + DVUA0066 0.72 -1.1 86,401 - DVUA0066 0.73 +0.0 86,411 - DVUA0066 0.74 +0.4 86,423 + DVUA0066 0.74 +0.7 86,433 + DVUA0066 0.75 +0.0 86,461 + DVUA0066 0.77 -0.4 86,490 - DVUA0066 0.79 -0.1 86,553 + DVUA0066 0.84 +0.7 86,606 + DVUA0066 0.87 +0.1 86,614 - DVUA0066 0.88 +0.5 86,672 - -1.1 86,707 + +0.2 86,765 - -0.3 86,780 - -1.0 87,076 - -0.7 87,215 - -2.2 87,409 + DVUA0067 0.22 -0.2 88,068 + DVUA0067 0.81 +0.5 88,291 - +0.0 88,403 + -0.3 88,530 + +0.3 88,760 + DVUA0068 0.22 +0.4 88,930 + DVUA0068 0.30 -0.2 88,942 - DVUA0068 0.31 -1.0 88,996 + DVUA0068 0.33 +0.2 88,997 - DVUA0068 0.33 -0.3 88,999 - DVUA0068 0.34 +0.1 89,092 + DVUA0068 0.38 -0.7 89,100 - DVUA0068 0.39 -0.1 89,153 + DVUA0068 0.41 +0.1 89,170 + DVUA0068 0.42 -1.3 89,210 + DVUA0068 0.44 -0.5 89,222 + DVUA0068 0.45 +0.1 89,245 + DVUA0068 0.46 -0.7 89,275 + DVUA0068 0.48 +1.1
Or see this region's nucleotide sequence