Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0070
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
---|---|---|---|---|---|
remove | |||||
91,112 | - | DVUA0069 | 0.21 | -0.6 | |
91,231 | - | DVUA0069 | 0.31 | -1.1 | |
91,231 | - | DVUA0069 | 0.31 | +0.4 | |
91,275 | + | DVUA0069 | 0.35 | -0.3 | |
91,323 | - | DVUA0069 | 0.39 | +0.1 | |
91,345 | - | DVUA0069 | 0.41 | -0.1 | |
91,364 | + | DVUA0069 | 0.43 | -1.1 | |
91,400 | - | DVUA0069 | 0.46 | +0.4 | |
91,475 | + | DVUA0069 | 0.52 | -0.7 | |
91,525 | - | DVUA0069 | 0.56 | +0.1 | |
91,590 | - | DVUA0069 | 0.62 | -0.1 | |
91,615 | + | DVUA0069 | 0.64 | +0.1 | |
91,741 | + | DVUA0069 | 0.75 | +0.5 | |
91,778 | + | DVUA0069 | 0.78 | -0.6 | |
91,831 | - | DVUA0069 | 0.83 | -0.6 | |
91,860 | - | DVUA0069 | 0.85 | +0.7 | |
91,910 | + | DVUA0069 | 0.90 | +0.2 | |
91,925 | + | +1.0 | |||
91,938 | - | -1.1 | |||
92,058 | + | +0.2 | |||
92,344 | - | DVUA0070 | 0.13 | -0.9 | |
92,854 | + | DVUA0070 | 0.39 | -1.6 | |
92,911 | + | DVUA0070 | 0.42 | -1.1 | |
92,941 | + | DVUA0070 | 0.44 | -1.2 | |
94,017 | + | -1.3 | |||
94,160 | + | -0.9 | |||
94,231 | + | +1.0 | |||
94,252 | + | -1.9 | |||
94,383 | + | DVUA0071 | 0.12 | -1.7 | |
94,678 | + | DVUA0071 | 0.26 | -1.3 | |
94,714 | + | DVUA0071 | 0.28 | -2.1 | |
94,979 | - | DVUA0071 | 0.40 | -0.4 |
Or see this region's nucleotide sequence