Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0214
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
---|---|---|---|---|---|
remove | |||||
253,473 | + | DVU0213 | 0.34 | +0.1 | |
253,577 | - | DVU0213 | 0.41 | -0.7 | |
253,623 | + | DVU0213 | 0.44 | -0.4 | |
253,674 | + | DVU0213 | 0.47 | +0.6 | |
253,683 | - | DVU0213 | 0.48 | +0.0 | |
253,754 | + | DVU0213 | 0.53 | +0.1 | |
253,754 | + | DVU0213 | 0.53 | -0.2 | |
253,754 | + | DVU0213 | 0.53 | -0.1 | |
253,769 | + | DVU0213 | 0.54 | -2.0 | |
253,803 | - | DVU0213 | 0.56 | -0.6 | |
254,203 | - | DVU0213 | 0.83 | -0.8 | |
254,218 | - | DVU0213 | 0.84 | -0.4 | |
255,244 | + | DVU0214 | 0.65 | -1.0 | |
255,249 | + | DVU0214 | 0.65 | -0.9 | |
255,268 | - | DVU0214 | 0.67 | -0.4 | |
255,563 | - | +0.0 | |||
255,932 | - | DVU0215 | 0.13 | +0.6 | |
256,100 | + | DVU0215 | 0.27 | +0.1 | |
256,105 | + | DVU0215 | 0.28 | -0.1 | |
256,167 | - | DVU0215 | 0.33 | -0.4 | |
256,173 | - | DVU0215 | 0.34 | +0.8 | |
256,180 | - | DVU0215 | 0.34 | -0.1 | |
256,287 | + | DVU0215 | 0.44 | -0.1 | |
256,337 | + | DVU0215 | 0.48 | -0.2 | |
256,376 | - | DVU0215 | 0.52 | +0.5 |
Or see this region's nucleotide sequence