Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0210 and DVU0211 are separated by 49 nucleotides DVU0211 and DVU0212 overlap by 1 nucleotides DVU0212 and DVU0213 are separated by 199 nucleotides
DVU0210: DVU0210 - tail sheath protein, putative (TIGR), at 250,631 to 252,094
DVU0210
DVU0211: DVU0211 - tail tube protein, putative (TIGR), at 252,144 to 252,509
DVU0211
DVU0212: DVU0212 - conserved hypothetical protein (TIGR), at 252,509 to 252,769
DVU0212
DVU0213: DVU0213 - conserved domain protein (TIGR), at 252,969 to 254,459
DVU0213
Position (kb) 252
253 Strain fitness (log2 ratio) -2
-1
0
1 at 251.730 kb on - strand, within DVU0210 at 251.741 kb on - strand, within DVU0210 at 252.022 kb on + strand at 252.022 kb on + strand at 252.069 kb on + strand at 252.616 kb on - strand, within DVU0212 at 252.635 kb on - strand, within DVU0212 at 252.757 kb on - strand at 253.170 kb on - strand, within DVU0213 at 253.370 kb on + strand, within DVU0213 at 253.380 kb on + strand, within DVU0213 at 253.390 kb on - strand, within DVU0213 at 253.402 kb on - strand, within DVU0213 at 253.412 kb on - strand, within DVU0213 at 253.442 kb on + strand, within DVU0213 at 253.473 kb on + strand, within DVU0213 at 253.577 kb on - strand, within DVU0213 at 253.623 kb on + strand, within DVU0213 at 253.674 kb on + strand, within DVU0213 at 253.683 kb on - strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.769 kb on + strand, within DVU0213
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 251,730 - DVU0210 0.75 +0.1 251,741 - DVU0210 0.76 -0.8 252,022 + +0.9 252,022 + -0.0 252,069 + +0.2 252,616 - DVU0212 0.41 -0.8 252,635 - DVU0212 0.48 -0.3 252,757 - +0.0 253,170 - DVU0213 0.13 -0.0 253,370 + DVU0213 0.27 -0.0 253,380 + DVU0213 0.28 -1.3 253,390 - DVU0213 0.28 +0.1 253,402 - DVU0213 0.29 +0.2 253,412 - DVU0213 0.30 +1.2 253,442 + DVU0213 0.32 +0.4 253,473 + DVU0213 0.34 +0.1 253,577 - DVU0213 0.41 -0.7 253,623 + DVU0213 0.44 -0.4 253,674 + DVU0213 0.47 +0.6 253,683 - DVU0213 0.48 +0.0 253,754 + DVU0213 0.53 +0.1 253,754 + DVU0213 0.53 -0.2 253,754 + DVU0213 0.53 -0.1 253,769 + DVU0213 0.54 -2.0
Or see this region's nucleotide sequence