Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3348
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,518,853 | + | DORF24435 | 0.65 | +1.0 | |
3,518,853 | + | DORF24435 | 0.65 | +0.2 | |
3,518,982 | - | +0.2 | |||
3,519,057 | - | -0.1 | |||
3,519,107 | + | -0.4 | |||
3,519,129 | + | -0.9 | |||
3,519,191 | - | -0.3 | |||
3,519,225 | - | +0.3 | |||
3,519,249 | + | -0.5 | |||
3,519,249 | + | -1.9 | |||
3,519,257 | - | -1.2 | |||
3,519,257 | - | +0.0 | |||
3,519,561 | + | DVU3347 | 0.54 | -1.7 | |
3,519,842 | + | -0.4 | |||
3,519,850 | - | -1.4 | |||
3,520,022 | + | DVU3348 | 0.27 | -0.2 | |
3,520,250 | + | DVU3348 | 0.56 | -0.7 | |
3,520,310 | + | DVU3348 | 0.63 | -0.7 | |
3,520,932 | - | DVU3349 | 0.31 | -0.5 | |
3,520,947 | - | DVU3349 | 0.33 | -0.5 | |
3,521,403 | - | DVU3349 | 0.75 | -0.1 |
Or see this region's nucleotide sequence