Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3063

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
3,195,691	+		DVU3062	0.73	-0.3
3,195,719	+		DVU3062	0.74	-0.1
3,195,719	+		DVU3062	0.74	-0.1
3,195,719	+		DVU3062	0.74	-0.5
3,195,738	-		DVU3062	0.74	-0.2
3,195,765	+		DVU3062	0.75	+0.5
3,195,869	-		DVU3062	0.79	+0.6
3,195,888	-		DVU3062	0.79	-1.4
3,195,919	-		DVU3062	0.80	-0.1
3,195,930	-		DVU3062	0.80	-1.7
3,195,996	-		DVU3062	0.82	-0.4
3,196,024	+		DVU3062	0.83	-0.0
3,196,042	+		DVU3062	0.84	-0.7
3,196,050	-		DVU3062	0.84	+0.9
3,196,085	-		DVU3062	0.85	-0.4
3,196,195	+		DVU3062	0.89	+0.0
3,196,218	+		DVU3062	0.89	-0.1
3,196,239	-		DVU3062	0.90	+0.6
3,196,263	+				-0.2
3,196,456	-				-0.6
3,196,456	-				+0.7
3,196,489	+				-0.1
3,196,559	+				-0.8
3,196,621	-				+0.4
3,196,621	-				-0.1
3,196,621	-				+0.0
3,196,661	+				+0.4
3,196,795	+				+0.3
3,196,831	-				-0.2
3,196,840	+				-0.5
3,196,861	+	mviN-2	DVU3063	0.10	-0.1
3,196,876	+	mviN-2	DVU3063	0.11	-1.9
3,196,879	-	mviN-2	DVU3063	0.11	+0.7
3,196,881	+	mviN-2	DVU3063	0.12	-0.9
3,196,881	+	mviN-2	DVU3063	0.12	-0.2
3,196,886	+	mviN-2	DVU3063	0.12	+0.3
3,196,894	-	mviN-2	DVU3063	0.12	-2.0
3,196,963	+	mviN-2	DVU3063	0.16	-2.0
3,197,031	-	mviN-2	DVU3063	0.20	-0.1
3,197,147	+	mviN-2	DVU3063	0.27	-1.1
3,197,147	+	mviN-2	DVU3063	0.27	-0.9
3,197,176	-	mviN-2	DVU3063	0.29	+0.2
3,197,297	+	mviN-2	DVU3063	0.36	-0.9
3,197,297	+	mviN-2	DVU3063	0.36	-0.5
3,197,305	-	mviN-2	DVU3063	0.37	-0.2
3,197,523	+	mviN-2	DVU3063	0.50	-1.0
3,197,552	-	mviN-2	DVU3063	0.51	-1.2
3,197,585	-	mviN-2	DVU3063	0.53	-1.2
3,197,661	+	mviN-2	DVU3063	0.58	-0.7
3,197,669	-	mviN-2	DVU3063	0.58	-0.5
3,197,671	+	mviN-2	DVU3063	0.58	+0.9
3,197,679	-	mviN-2	DVU3063	0.59	-1.6
3,197,730	-	mviN-2	DVU3063	0.62	+0.3
3,197,798	-	mviN-2	DVU3063	0.66	+0.9
3,197,882	+	mviN-2	DVU3063	0.71	-1.7
3,197,900	+	mviN-2	DVU3063	0.72	-0.6
3,197,913	+	mviN-2	DVU3063	0.73	+1.3
3,197,927	+	mviN-2	DVU3063	0.73	-0.3
3,198,059	-	mviN-2	DVU3063	0.81	-0.1
3,198,160	-	mviN-2	DVU3063	0.87	-0.0
3,198,167	+	mviN-2	DVU3063	0.88	-0.9
3,198,263	-				+2.3
3,198,323	+				-0.8
3,198,353	-				-0.1
3,198,370	-				-0.5
3,198,380	-				-0.2
3,198,513	-				-0.5
3,198,526	-				+0.2
3,198,531	-				-0.8
3,198,548	-				+0.3
3,198,554	+				-0.4
3,198,562	-				+0.1
3,198,578	+				+0.6
3,198,620	-				-0.6
3,198,668	+				+0.2
3,198,668	+				-1.7
3,198,668	+				-0.3
3,198,668	+				-0.1
3,198,676	-				-0.2
3,198,700	-				-0.2
3,198,702	+				-0.6
3,198,702	+				-0.5
3,198,712	-				-0.5
3,198,770	+				+0.2
3,198,800	+				+0.4
3,198,814	-				+0.4
3,198,820	-				-0.2
3,198,956	+		DVU3064	0.12	-0.0
3,199,011	+		DVU3064	0.16	-0.1
3,199,016	+		DVU3064	0.16	-0.2
3,199,019	-		DVU3064	0.16	-0.1
3,199,021	+		DVU3064	0.16	-0.7
3,199,021	+		DVU3064	0.16	-0.0
3,199,034	+		DVU3064	0.17	+0.1
3,199,055	+		DVU3064	0.18	-0.7
3,199,055	+		DVU3064	0.18	+0.3
3,199,214	+		DVU3064	0.27	-0.6
3,199,224	-		DVU3064	0.28	+0.1
3,199,249	-		DVU3064	0.29	-0.1
3,199,271	-		DVU3064	0.31	+0.0
3,199,273	+		DVU3064	0.31	-1.2
3,199,292	+		DVU3064	0.32	+0.7
3,199,308	+		DVU3064	0.33	-0.2