Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2690 and DORF43274 overlap by 8 nucleotides DORF43274 and DVU2691 overlap by 49 nucleotides DVU2691 and DVU2692 are separated by 9 nucleotides DVU2692 and DVU2693 are separated by 85 nucleotides DVU2693 and DVU2694 are separated by 81 nucleotides DVU2694 and DVU2695 are separated by 8 nucleotides
DVU2690: DVU2690 - hypothetical protein (TIGR), at 2,804,317 to 2,804,904
DVU2690
DORF43274: DORF43274 - no description, at 2,804,897 to 2,805,226
DORF43274
DVU2691: DVU2691 - hypothetical protein (TIGR), at 2,805,178 to 2,805,711
DVU2691
DVU2692: DVU2692 - conserved domain protein (TIGR), at 2,805,721 to 2,805,957
DVU2692
DVU2693: DVU2693 - hypothetical protein (TIGR), at 2,806,043 to 2,806,282
DVU2693
DVU2694: DVU2694 - hypothetical protein (TIGR), at 2,806,364 to 2,806,798
DVU2694
DVU2695: DVU2695 - conserved hypothetical protein (TIGR), at 2,806,807 to 2,807,223
DVU2695
Position (kb)
2805
2806 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2804.759 kb on + strand, within DVU2690 at 2804.765 kb on - strand, within DVU2690 at 2804.821 kb on - strand, within DVU2690 at 2804.825 kb on + strand, within DVU2690 at 2804.879 kb on - strand at 2804.887 kb on - strand at 2804.893 kb on + strand at 2804.893 kb on + strand at 2804.893 kb on + strand at 2804.907 kb on + strand at 2805.015 kb on - strand, within DORF43274 at 2805.015 kb on - strand, within DORF43274 at 2805.061 kb on - strand, within DORF43274 at 2805.114 kb on - strand, within DORF43274 at 2805.123 kb on + strand, within DORF43274 at 2805.191 kb on + strand at 2805.259 kb on + strand, within DVU2691 at 2805.259 kb on + strand, within DVU2691 at 2805.478 kb on + strand, within DVU2691 at 2805.486 kb on - strand, within DVU2691 at 2805.533 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.636 kb on + strand, within DVU2691 at 2805.645 kb on - strand, within DVU2691 at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.743 kb on - strand at 2805.865 kb on + strand, within DVU2692 at 2805.946 kb on - strand at 2806.015 kb on + strand at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.277 kb on - strand at 2806.364 kb on - strand at 2806.365 kb on + strand at 2806.373 kb on - strand at 2806.486 kb on - strand, within DVU2694 at 2806.542 kb on - strand, within DVU2694 at 2806.574 kb on + strand, within DVU2694 at 2806.608 kb on + strand, within DVU2694 at 2806.608 kb on + strand, within DVU2694 at 2806.616 kb on - strand, within DVU2694 at 2806.670 kb on + strand, within DVU2694 at 2806.736 kb on - strand, within DVU2694 at 2806.742 kb on - strand, within DVU2694 at 2806.747 kb on - strand, within DVU2694 at 2806.755 kb on - strand at 2806.759 kb on + strand at 2806.782 kb on + strand at 2806.790 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 2,804,759 + DVU2690 0.75 +0.4 2,804,765 - DVU2690 0.76 +1.9 2,804,821 - DVU2690 0.86 -0.2 2,804,825 + DVU2690 0.86 -0.3 2,804,879 - +0.5 2,804,887 - -1.5 2,804,893 + +0.1 2,804,893 + -0.5 2,804,893 + -0.4 2,804,907 + -0.5 2,805,015 - DORF43274 0.36 +0.4 2,805,015 - DORF43274 0.36 -0.6 2,805,061 - DORF43274 0.50 +0.4 2,805,114 - DORF43274 0.66 -0.1 2,805,123 + DORF43274 0.68 -1.3 2,805,191 + -0.0 2,805,259 + DVU2691 0.15 -0.1 2,805,259 + DVU2691 0.15 -0.3 2,805,478 + DVU2691 0.56 +0.6 2,805,486 - DVU2691 0.58 -0.4 2,805,533 - DVU2691 0.66 -0.6 2,805,552 - DVU2691 0.70 -0.0 2,805,552 - DVU2691 0.70 -0.6 2,805,636 + DVU2691 0.86 +0.1 2,805,645 - DVU2691 0.87 -1.9 2,805,687 - +0.5 2,805,687 - -0.9 2,805,687 - -0.3 2,805,743 - -0.2 2,805,865 + DVU2692 0.61 -0.5 2,805,946 - -0.5 2,806,015 + -0.3 2,806,155 + DVU2693 0.47 -0.0 2,806,155 + DVU2693 0.47 -0.8 2,806,155 + DVU2693 0.47 -0.2 2,806,155 + DVU2693 0.47 -0.1 2,806,155 + DVU2693 0.47 -0.2 2,806,155 + DVU2693 0.47 -1.8 2,806,163 - DVU2693 0.50 -0.2 2,806,163 - DVU2693 0.50 -0.9 2,806,163 - DVU2693 0.50 -1.1 2,806,163 - DVU2693 0.50 -0.0 2,806,277 - -0.7 2,806,364 - -0.2 2,806,365 + -1.0 2,806,373 - +1.2 2,806,486 - DVU2694 0.28 -0.1 2,806,542 - DVU2694 0.41 -1.0 2,806,574 + DVU2694 0.48 -0.7 2,806,608 + DVU2694 0.56 -0.0 2,806,608 + DVU2694 0.56 -0.5 2,806,616 - DVU2694 0.58 -0.9 2,806,670 + DVU2694 0.70 +0.8 2,806,736 - DVU2694 0.86 -0.4 2,806,742 - DVU2694 0.87 -0.9 2,806,747 - DVU2694 0.88 -0.5 2,806,755 - -0.2 2,806,759 + +0.1 2,806,782 + +1.0 2,806,790 - +0.2
Or see this region's nucleotide sequence