Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2216

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
2,310,725	+		DVU2213	0.65	-1.2
2,310,740	-		DVU2213	0.67	-1.8
2,310,781	-		DVU2213	0.73	+0.1
2,310,786	-		DVU2213	0.74	-0.2
2,310,817	+		DVU2213	0.78	+0.0
2,310,824	+		DVU2213	0.79	-0.4
2,310,824	+		DVU2213	0.79	-0.5
2,310,824	+		DVU2213	0.79	-0.2
2,310,834	-		DVU2213	0.80	-1.0
2,310,905	+				-0.0
2,310,910	+				-0.3
2,310,918	-				-0.0
2,310,923	-				-0.0
2,310,925	-				+0.3
2,310,938	-				-0.7
2,310,941	+				+0.1
2,310,993	+				-0.5
2,311,083	-		DVU2214	0.19	-2.5
2,311,106	-		DVU2214	0.32	-0.7
2,311,133	+		DVU2214	0.48	-0.1
2,311,156	-		DVU2214	0.61	-1.2
2,311,168	-		DVU2214	0.68	+0.4
2,311,887	+	infA-2	DVU2216	0.61	-1.0
2,311,887	+	infA-2	DVU2216	0.61	-0.5
2,311,929	-	infA-2	DVU2216	0.77	-1.0
2,311,936	+	infA-2	DVU2216	0.80	-0.1
2,311,997	+				-0.0
2,312,081	-				-0.2
2,312,125	+				+0.1
2,312,312	-				+0.6
2,312,528	-				-0.0
2,312,754	-		DVU2217	0.46	-0.0
2,312,764	-		DVU2217	0.48	-0.2
2,312,791	+		DVU2217	0.53	-1.6
2,312,794	-		DVU2217	0.53	+0.1
2,312,794	-		DVU2217	0.53	+0.2
2,312,806	-		DVU2217	0.56	+0.2
2,312,814	-		DVU2217	0.57	-1.7
2,312,906	-		DVU2217	0.76	+0.4
2,312,921	-		DVU2217	0.79	-1.0