Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1873

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
1,939,082	-	aspA	DVU1871	0.66	-0.7
1,939,336	-	aspA	DVU1871	0.84	-0.1
1,939,545	+				-0.5
1,939,545	+				+0.0
1,939,650	-				+0.1
1,939,664	-				+0.2
1,939,700	-				+0.2
1,939,738	-				+0.0
1,939,909	-				-1.0
1,940,058	+				-0.3
1,940,156	+	ppiB-2	DVU1873	0.17	-0.6
1,940,156	+	ppiB-2	DVU1873	0.17	+0.6
1,940,156	+	ppiB-2	DVU1873	0.17	-1.2
1,940,164	-	ppiB-2	DVU1873	0.18	-0.4
1,940,182	-	ppiB-2	DVU1873	0.22	-0.4
1,940,190	-	ppiB-2	DVU1873	0.23	-0.5
1,940,212	+	ppiB-2	DVU1873	0.28	-0.7
1,940,587	-				-0.1
1,940,607	+				-0.8
1,940,632	-				-0.3
1,940,729	-				-1.1
1,940,894	-				-1.5
1,940,904	-				+0.4
1,940,914	-				+0.1
1,941,116	-				+0.3
1,941,154	+	clpB	DVU1874	0.11	+1.6
1,941,154	+	clpB	DVU1874	0.11	-1.5
1,941,168	+	clpB	DVU1874	0.11	-0.2
1,941,227	-	clpB	DVU1874	0.14	-1.9
1,941,275	-	clpB	DVU1874	0.16	+0.2
1,941,388	+	clpB	DVU1874	0.20	-0.0
1,941,396	-	clpB	DVU1874	0.20	-0.4
1,941,398	+	clpB	DVU1874	0.20	-0.7
1,941,398	+	clpB	DVU1874	0.20	-0.2
1,941,406	-	clpB	DVU1874	0.21	-0.2
1,941,492	-	clpB	DVU1874	0.24	+0.3
1,941,519	-	clpB	DVU1874	0.25	-0.5