Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1787
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,849,172 | - | DVU1786 | 0.11 | -0.3 | |
1,849,205 | + | DVU1786 | 0.14 | +0.1 | |
1,849,205 | + | DVU1786 | 0.14 | -0.5 | |
1,849,259 | + | DVU1786 | 0.19 | +0.0 | |
1,849,304 | - | DVU1786 | 0.23 | -0.3 | |
1,849,408 | + | DVU1786 | 0.33 | +0.8 | |
1,849,427 | + | DVU1786 | 0.35 | +0.2 | |
1,849,713 | - | DVU1786 | 0.62 | +0.5 | |
1,850,153 | - | -0.8 | |||
1,850,338 | + | DVU1787 | 0.30 | -0.5 | |
1,850,338 | + | DVU1787 | 0.30 | +0.7 | |
1,850,625 | - | DVU1787 | 0.76 | -1.7 | |
1,850,625 | - | DVU1787 | 0.76 | -0.4 | |
1,850,635 | - | DVU1787 | 0.78 | -1.3 | |
1,850,854 | + | -0.2 | |||
1,850,854 | + | +0.0 | |||
1,850,862 | - | -0.2 | |||
1,850,909 | - | -0.2 | |||
1,850,987 | - | +0.2 | |||
1,850,987 | - | -0.4 |
Or see this region's nucleotide sequence