Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1571
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 1,652,825 | + | porB | DVU1570 | 0.45 | -0.1 |
| 1,653,107 | - | porB | DVU1570 | 0.78 | -0.1 |
| 1,653,164 | - | porB | DVU1570 | 0.85 | -0.5 |
| 1,653,208 | - | -0.3 | |||
| 1,653,433 | - | -0.3 | |||
| 1,653,433 | - | +0.1 | |||
| 1,653,461 | + | -0.2 | |||
| 1,653,470 | + | -0.1 | |||
| 1,653,521 | + | +0.2 | |||
| 1,653,521 | + | +0.2 | |||
| 1,653,529 | - | -0.0 | |||
| 1,653,626 | + | -0.3 | |||
| 1,653,626 | + | -0.5 | |||
| 1,653,979 | - | rho | DVU1571 | 0.18 | -2.1 |
| 1,654,334 | - | rho | DVU1571 | 0.47 | -1.4 |
| 1,655,297 | + | +0.1 | |||
| 1,655,513 | + | DVU1572 | 0.36 | -1.3 | |
| 1,655,578 | + | DVU1572 | 0.49 | -2.6 | |
| 1,655,817 | - | -1.2 | |||
| 1,655,821 | + | -1.0 |
Or see this region's nucleotide sequence