Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1342

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
1,418,138	-	ZUR	DVU1340	0.75	+0.4
1,418,142	+	ZUR	DVU1340	0.76	+0.5
1,418,150	-	ZUR	DVU1340	0.78	-0.2
1,418,160	-	ZUR	DVU1340	0.80	+0.2
1,418,200	-	ZUR	DVU1340	0.88	-0.5
1,418,208	-	ZUR	DVU1340	0.89	-0.9
1,418,219	+				+0.0
1,418,245	+				-0.0
1,418,279	+				-0.2
1,418,318	-				+0.1
1,418,366	-	znuC	DVU1341	0.13	-0.2
1,418,368	+	znuC	DVU1341	0.13	-0.5
1,418,437	-	znuC	DVU1341	0.22	-0.2
1,418,485	+	znuC	DVU1341	0.28	-0.1
1,418,617	+	znuC	DVU1341	0.44	-0.1
1,418,625	-	znuC	DVU1341	0.45	+0.1
1,418,640	+	znuC	DVU1341	0.46	-0.5
1,418,682	+	znuC	DVU1341	0.52	-0.3
1,418,690	-	znuC	DVU1341	0.52	-0.8
1,418,795	+	znuC	DVU1341	0.65	-0.1
1,418,803	-	znuC	DVU1341	0.66	-0.1
1,418,803	-	znuC	DVU1341	0.66	+0.2
1,418,808	-	znuC	DVU1341	0.67	-0.4
1,418,862	+	znuC	DVU1341	0.73	-0.4
1,418,874	+	znuC	DVU1341	0.75	+0.5
1,418,888	+	znuC	DVU1341	0.76	-0.2
1,418,957	-	znuC	DVU1341	0.85	+0.1
1,419,089	-				-0.3
1,419,227	+	znuB	DVU1342	0.18	-0.4
1,419,238	+	znuB	DVU1342	0.19	-0.8
1,419,265	+	znuB	DVU1342	0.23	-0.3
1,419,265	+	znuB	DVU1342	0.23	-1.1
1,419,325	+	znuB	DVU1342	0.30	-0.1
1,419,403	-	znuB	DVU1342	0.40	-2.0
1,419,410	+	znuB	DVU1342	0.41	-0.9
1,419,457	-	znuB	DVU1342	0.46	-1.0
1,419,457	-	znuB	DVU1342	0.46	-0.2
1,419,493	+	znuB	DVU1342	0.51	+0.2
1,419,496	-	znuB	DVU1342	0.51	-0.4
1,419,498	+	znuB	DVU1342	0.51	+0.0
1,419,498	+	znuB	DVU1342	0.51	-0.8
1,419,498	+	znuB	DVU1342	0.51	-0.3
1,419,572	+	znuB	DVU1342	0.61	-1.8
1,419,593	-	znuB	DVU1342	0.63	-1.1
1,419,595	-	znuB	DVU1342	0.63	-0.6
1,419,626	+	znuB	DVU1342	0.67	-0.5
1,419,626	+	znuB	DVU1342	0.67	-0.1
1,419,723	+	znuB	DVU1342	0.79	-0.7
1,419,733	+	znuB	DVU1342	0.81	-0.5
1,419,823	+				+0.1
1,419,839	-				-1.0
1,419,860	+				+0.3
1,419,861	+				-0.5
1,419,877	-				-0.2
1,420,003	+	znuA	DVU1343	0.11	-0.7
1,420,003	+	znuA	DVU1343	0.11	+0.1
1,420,011	-	znuA	DVU1343	0.12	-0.1
1,420,011	-	znuA	DVU1343	0.12	-0.8
1,420,011	-	znuA	DVU1343	0.12	-0.2
1,420,035	+	znuA	DVU1343	0.14	-0.5
1,420,046	+	znuA	DVU1343	0.15	-1.0
1,420,111	-	znuA	DVU1343	0.22	-0.7
1,420,142	+	znuA	DVU1343	0.25	-1.7
1,420,159	+	znuA	DVU1343	0.26	+0.2
1,420,200	+	znuA	DVU1343	0.31	-0.3
1,420,204	+	znuA	DVU1343	0.31	-0.5
1,420,221	+	znuA	DVU1343	0.33	-0.2
1,420,239	-	znuA	DVU1343	0.34	-0.5
1,420,291	+	znuA	DVU1343	0.40	-0.3
1,420,315	-	znuA	DVU1343	0.42	-0.5
1,420,382	+	znuA	DVU1343	0.49	-0.0
1,420,440	-	znuA	DVU1343	0.54	-0.6
1,420,482	-	znuA	DVU1343	0.59	-0.1
1,420,542	-	znuA	DVU1343	0.64	-0.3
1,420,610	+	znuA	DVU1343	0.71	-0.2
1,420,649	+	znuA	DVU1343	0.75	-0.6