Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1336

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
1,411,081	+				-0.4
1,411,081	+				+0.2
1,411,081	+				+0.7
1,411,081	+				-0.5
1,411,081	+				-1.3
1,411,081	+				-0.6
1,411,089	-				+0.0
1,411,089	-				-2.0
1,411,089	-				-0.2
1,411,104	+				-0.5
1,411,544	+	clpP	DVU1335	0.45	-0.3
1,411,570	-	clpP	DVU1335	0.49	-0.2
1,411,570	-	clpP	DVU1335	0.49	+1.4
1,411,722	-	clpP	DVU1335	0.74	-0.3
1,411,761	+	clpP	DVU1335	0.81	-1.6
1,411,796	+	clpP	DVU1335	0.86	-1.5
1,411,804	-	clpP	DVU1335	0.88	-0.7
1,411,832	-				-0.5
1,411,982	+				-0.6
1,411,990	-				-1.8
1,412,033	+	clpX	DVU1336	0.11	-1.1
1,412,038	-	clpX	DVU1336	0.12	-0.6
1,412,130	-	clpX	DVU1336	0.19	-2.0
1,412,218	+	clpX	DVU1336	0.26	-0.7
1,412,478	+	clpX	DVU1336	0.47	-0.2
1,412,601	+	clpX	DVU1336	0.57	-1.5
1,412,801	-	clpX	DVU1336	0.73	-0.9
1,412,886	+	clpX	DVU1336	0.80	-0.6
1,412,894	-	clpX	DVU1336	0.80	-0.6
1,412,920	+	clpX	DVU1336	0.82	-1.3
1,412,992	+	clpX	DVU1336	0.88	-0.1
1,413,183	+				-0.2
1,413,220	-				-0.5
1,413,251	-				-1.7
1,413,304	+				-0.7
1,413,304	+				-0.2
1,413,304	+				+0.3
1,413,337	-				+0.3
1,413,456	+				-1.0
1,413,625	+	lon	DVU1337	0.15	+1.5
1,413,705	+	lon	DVU1337	0.18	-0.6
1,413,768	+	lon	DVU1337	0.21	-0.6
1,413,781	-	lon	DVU1337	0.21	-0.7
1,413,809	-	lon	DVU1337	0.22	-0.5
1,413,820	-	lon	DVU1337	0.23	+0.0
1,413,860	-	lon	DVU1337	0.24	+0.0
1,413,960	-	lon	DVU1337	0.28	-2.1
1,413,995	+	lon	DVU1337	0.30	-1.6
1,414,003	-	lon	DVU1337	0.30	+0.2
1,414,003	-	lon	DVU1337	0.30	+1.5
1,414,003	-	lon	DVU1337	0.30	+0.7
1,414,014	+	lon	DVU1337	0.31	-0.0
1,414,014	+	lon	DVU1337	0.31	-2.4
1,414,093	-	lon	DVU1337	0.34	+0.9