Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1058

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
1,158,059	-	nikO	DVU1056	0.86	+0.2
1,158,222	+				+0.2
1,158,231	+				-1.6
1,158,268	+	nikQ	DVU1057	0.13	-1.5
1,158,278	-	nikQ	DVU1057	0.14	+0.2
1,158,389	-	nikQ	DVU1057	0.28	+0.4
1,158,434	+	nikQ	DVU1057	0.34	-0.5
1,158,527	-	nikQ	DVU1057	0.46	-0.5
1,158,956	-				-0.1
1,158,995	-				-1.3
1,159,079	+	nikM	DVU1058	0.22	-0.7
1,159,177	+	nikM	DVU1058	0.38	-2.3
1,159,263	-	nikM	DVU1058	0.52	-0.2
1,159,403	+	nikM	DVU1058	0.75	-1.3
1,159,485	-	nikM	DVU1058	0.88	+0.0
1,159,486	-	nikM	DVU1058	0.88	-2.1
1,159,543	+				+0.8
1,159,582	-				+0.4
1,159,632	-				-0.0
1,159,709	+				-0.9
1,159,808	-				-1.6
1,159,815	+				+0.4
1,159,874	-				+0.2
1,159,921	-		DVU1059	0.12	-0.2
1,159,948	+		DVU1059	0.14	+0.2
1,160,024	+		DVU1059	0.21	+0.4
1,160,024	+		DVU1059	0.21	+0.3
1,160,032	-		DVU1059	0.22	-0.6
1,160,032	-		DVU1059	0.22	-0.7
1,160,069	+		DVU1059	0.25	-1.4
1,160,082	-		DVU1059	0.26	-1.6
1,160,085	+		DVU1059	0.26	+0.7
1,160,205	-		DVU1059	0.36	+0.2
1,160,231	-		DVU1059	0.39	+0.1
1,160,234	+		DVU1059	0.39	+0.7
1,160,413	-		DVU1059	0.54	-0.7
1,160,415	+		DVU1059	0.54	+0.5
1,160,462	+		DVU1059	0.58	-0.1
1,160,547	-		DVU1059	0.66	+0.1