Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0721 and DVU0722 overlap by 14 nucleotides DVU0722 and purT are separated by 116 nucleotides
DVU0721: DVU0721 - sensory box histidine kinase (TIGR), at 800,690 to 803,455
DVU0721
DVU0722: DVU0722 - response regulator (TIGR), at 803,442 to 804,998
DVU0722
DVU0723: purT - phosphoribosylglycinamide formyltransferase 2 (TIGR), at 805,115 to 806,296
purT
Position (kb) 803
804
805 Strain fitness (log2 ratio) -2
-1
0
1
2 at 802.474 kb on + strand, within DVU0721 at 802.538 kb on - strand, within DVU0721 at 802.557 kb on + strand, within DVU0721 at 802.711 kb on + strand, within DVU0721 at 802.755 kb on - strand, within DVU0721 at 802.940 kb on - strand, within DVU0721 at 802.985 kb on - strand, within DVU0721 at 803.112 kb on - strand, within DVU0721 at 803.134 kb on - strand, within DVU0721 at 803.156 kb on - strand, within DVU0721 at 803.156 kb on - strand, within DVU0721 at 803.164 kb on + strand, within DVU0721 at 803.391 kb on - strand at 803.391 kb on - strand at 803.462 kb on - strand at 803.523 kb on + strand at 803.571 kb on + strand at 803.617 kb on + strand, within DVU0722 at 803.636 kb on - strand, within DVU0722 at 803.689 kb on + strand, within DVU0722 at 803.769 kb on + strand, within DVU0722 at 803.822 kb on + strand, within DVU0722 at 803.905 kb on + strand, within DVU0722 at 803.944 kb on - strand, within DVU0722 at 804.040 kb on + strand, within DVU0722 at 804.113 kb on + strand, within DVU0722 at 804.113 kb on + strand, within DVU0722 at 804.126 kb on - strand, within DVU0722 at 804.133 kb on + strand, within DVU0722 at 804.257 kb on - strand, within DVU0722 at 804.257 kb on - strand, within DVU0722 at 804.550 kb on + strand, within DVU0722 at 804.595 kb on - strand, within DVU0722 at 804.602 kb on + strand, within DVU0722 at 804.602 kb on + strand, within DVU0722 at 804.603 kb on - strand, within DVU0722 at 804.731 kb on - strand, within DVU0722 at 805.035 kb on - strand at 805.066 kb on + strand at 805.100 kb on - strand at 805.123 kb on + strand at 805.140 kb on + strand at 805.160 kb on - strand at 805.289 kb on - strand, within purT at 805.350 kb on - strand, within purT at 805.464 kb on - strand, within purT at 805.567 kb on - strand, within purT at 805.567 kb on - strand, within purT at 805.604 kb on + strand, within purT at 805.612 kb on - strand, within purT at 805.612 kb on - strand, within purT at 805.656 kb on - strand, within purT at 805.772 kb on - strand, within purT at 805.929 kb on + strand, within purT at 805.937 kb on + strand, within purT at 805.966 kb on + strand, within purT
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 802,474 + DVU0721 0.64 -0.2 802,538 - DVU0721 0.67 +0.4 802,557 + DVU0721 0.67 -0.3 802,711 + DVU0721 0.73 +0.2 802,755 - DVU0721 0.75 +1.3 802,940 - DVU0721 0.81 +2.0 802,985 - DVU0721 0.83 -0.0 803,112 - DVU0721 0.88 +0.1 803,134 - DVU0721 0.88 -0.3 803,156 - DVU0721 0.89 -1.0 803,156 - DVU0721 0.89 +0.4 803,164 + DVU0721 0.89 -0.2 803,391 - -0.2 803,391 - +0.7 803,462 - +0.3 803,523 + +0.0 803,571 + +0.3 803,617 + DVU0722 0.11 -0.2 803,636 - DVU0722 0.12 -0.5 803,689 + DVU0722 0.16 +0.6 803,769 + DVU0722 0.21 +0.3 803,822 + DVU0722 0.24 -0.2 803,905 + DVU0722 0.30 -0.7 803,944 - DVU0722 0.32 +1.7 804,040 + DVU0722 0.38 +0.9 804,113 + DVU0722 0.43 -1.9 804,113 + DVU0722 0.43 +0.5 804,126 - DVU0722 0.44 +1.3 804,133 + DVU0722 0.44 -0.5 804,257 - DVU0722 0.52 -0.3 804,257 - DVU0722 0.52 -0.0 804,550 + DVU0722 0.71 -0.0 804,595 - DVU0722 0.74 +1.3 804,602 + DVU0722 0.75 -0.4 804,602 + DVU0722 0.75 +0.1 804,603 - DVU0722 0.75 -0.0 804,731 - DVU0722 0.83 +0.4 805,035 - -0.1 805,066 + +0.2 805,100 - -0.1 805,123 + -0.8 805,140 + -0.2 805,160 - -0.1 805,289 - purT DVU0723 0.15 +0.1 805,350 - purT DVU0723 0.20 -0.2 805,464 - purT DVU0723 0.30 +0.0 805,567 - purT DVU0723 0.38 -1.9 805,567 - purT DVU0723 0.38 -1.5 805,604 + purT DVU0723 0.41 -0.4 805,612 - purT DVU0723 0.42 +0.1 805,612 - purT DVU0723 0.42 -0.8 805,656 - purT DVU0723 0.46 -0.5 805,772 - purT DVU0723 0.56 +0.0 805,929 + purT DVU0723 0.69 -0.4 805,937 + purT DVU0723 0.70 -0.4 805,966 + purT DVU0723 0.72 -0.4
Or see this region's nucleotide sequence