Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0692 and narH are separated by 3 nucleotides narH and DVU0694 are separated by 12 nucleotides DVU0694 and DORF6830 are separated by 15 nucleotides
DVU0692: DVU0692 - molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR), at 766,527 to 767,786
DVU0692
DVU0693: narH - molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO), at 767,790 to 768,557
narH
DVU0694: DVU0694 - molybdopterin oxidoreductase, molybdopterin-binding subunit, putative (TIGR), at 768,570 to 770,645
DVU0694
DORF6830: DORF6830 - SEED: FIG00602532: hypothetical protein, at 770,661 to 771,293
DORF6830
Position (kb) 768
769
770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 767.656 kb on + strand, within DVU0692 at 767.696 kb on - strand at 767.778 kb on - strand at 767.794 kb on + strand at 767.939 kb on + strand, within narH at 768.005 kb on + strand, within narH at 768.051 kb on + strand, within narH at 768.066 kb on - strand, within narH at 768.124 kb on - strand, within narH at 768.147 kb on + strand, within narH at 768.154 kb on + strand, within narH at 768.162 kb on - strand, within narH at 768.169 kb on + strand, within narH at 768.310 kb on + strand, within narH at 768.318 kb on - strand, within narH at 768.398 kb on + strand, within narH at 768.411 kb on - strand, within narH at 768.493 kb on - strand at 768.623 kb on - strand at 768.698 kb on + strand at 768.706 kb on - strand at 768.773 kb on - strand at 768.786 kb on - strand, within DVU0694 at 768.806 kb on - strand, within DVU0694 at 768.837 kb on + strand, within DVU0694 at 768.856 kb on + strand, within DVU0694 at 768.864 kb on - strand, within DVU0694 at 768.864 kb on - strand, within DVU0694 at 769.044 kb on + strand, within DVU0694 at 769.052 kb on - strand, within DVU0694 at 769.136 kb on + strand, within DVU0694 at 769.144 kb on - strand, within DVU0694 at 769.197 kb on - strand, within DVU0694 at 769.253 kb on - strand, within DVU0694 at 769.349 kb on + strand, within DVU0694 at 769.368 kb on - strand, within DVU0694 at 769.409 kb on - strand, within DVU0694 at 769.444 kb on + strand, within DVU0694 at 769.452 kb on - strand, within DVU0694 at 769.520 kb on - strand, within DVU0694 at 769.548 kb on - strand, within DVU0694 at 769.627 kb on - strand, within DVU0694 at 769.675 kb on + strand, within DVU0694 at 769.675 kb on + strand, within DVU0694 at 769.742 kb on + strand, within DVU0694 at 769.806 kb on - strand, within DVU0694 at 769.840 kb on - strand, within DVU0694 at 769.902 kb on + strand, within DVU0694 at 769.946 kb on - strand, within DVU0694 at 769.973 kb on - strand, within DVU0694 at 770.012 kb on + strand, within DVU0694 at 770.020 kb on - strand, within DVU0694 at 770.093 kb on - strand, within DVU0694 at 770.111 kb on - strand, within DVU0694 at 770.133 kb on + strand, within DVU0694 at 770.293 kb on - strand, within DVU0694 at 770.342 kb on - strand, within DVU0694 at 770.427 kb on + strand, within DVU0694 at 770.472 kb on - strand at 770.629 kb on + strand at 770.694 kb on - strand at 770.697 kb on + strand at 770.702 kb on + strand at 770.793 kb on + strand, within DORF6830 at 770.793 kb on + strand, within DORF6830 at 770.924 kb on + strand, within DORF6830 at 770.924 kb on + strand, within DORF6830 at 771.040 kb on + strand, within DORF6830 at 771.077 kb on + strand, within DORF6830 at 771.077 kb on + strand, within DORF6830 at 771.087 kb on - strand, within DORF6830 at 771.187 kb on + strand, within DORF6830 at 771.195 kb on - strand, within DORF6830 at 771.195 kb on - strand, within DORF6830 at 771.296 kb on - strand at 771.297 kb on - strand at 771.318 kb on - strand at 771.504 kb on + strand at 771.534 kb on + strand at 771.564 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 767,656 + DVU0692 0.90 -0.6 767,696 - +0.8 767,778 - -0.5 767,794 + -0.9 767,939 + narH DVU0693 0.19 +0.2 768,005 + narH DVU0693 0.28 -0.8 768,051 + narH DVU0693 0.34 -1.4 768,066 - narH DVU0693 0.36 -0.6 768,124 - narH DVU0693 0.43 -1.9 768,147 + narH DVU0693 0.46 -3.1 768,154 + narH DVU0693 0.47 -0.7 768,162 - narH DVU0693 0.48 +0.2 768,169 + narH DVU0693 0.49 +0.1 768,310 + narH DVU0693 0.68 -1.7 768,318 - narH DVU0693 0.69 -1.7 768,398 + narH DVU0693 0.79 -1.5 768,411 - narH DVU0693 0.81 -0.2 768,493 - -3.0 768,623 - -2.0 768,698 + -0.5 768,706 - -0.3 768,773 - -1.9 768,786 - DVU0694 0.10 -0.9 768,806 - DVU0694 0.11 -0.8 768,837 + DVU0694 0.13 -1.3 768,856 + DVU0694 0.14 -1.0 768,864 - DVU0694 0.14 -0.5 768,864 - DVU0694 0.14 -1.1 769,044 + DVU0694 0.23 -1.6 769,052 - DVU0694 0.23 -0.6 769,136 + DVU0694 0.27 -0.0 769,144 - DVU0694 0.28 -1.0 769,197 - DVU0694 0.30 -0.2 769,253 - DVU0694 0.33 -0.1 769,349 + DVU0694 0.38 +0.7 769,368 - DVU0694 0.38 +0.2 769,409 - DVU0694 0.40 -2.1 769,444 + DVU0694 0.42 -0.8 769,452 - DVU0694 0.42 -2.3 769,520 - DVU0694 0.46 +0.1 769,548 - DVU0694 0.47 -1.2 769,627 - DVU0694 0.51 -0.7 769,675 + DVU0694 0.53 -0.7 769,675 + DVU0694 0.53 -1.9 769,742 + DVU0694 0.56 -0.5 769,806 - DVU0694 0.60 -1.1 769,840 - DVU0694 0.61 -0.8 769,902 + DVU0694 0.64 -1.1 769,946 - DVU0694 0.66 -1.1 769,973 - DVU0694 0.68 -0.9 770,012 + DVU0694 0.69 -0.9 770,020 - DVU0694 0.70 -1.1 770,093 - DVU0694 0.73 -1.4 770,111 - DVU0694 0.74 -0.9 770,133 + DVU0694 0.75 -0.5 770,293 - DVU0694 0.83 -1.8 770,342 - DVU0694 0.85 -0.5 770,427 + DVU0694 0.89 -0.8 770,472 - -0.5 770,629 + -0.3 770,694 - -1.2 770,697 + -0.6 770,702 + -0.2 770,793 + DORF6830 0.21 +1.5 770,793 + DORF6830 0.21 -1.2 770,924 + DORF6830 0.42 -0.3 770,924 + DORF6830 0.42 -0.8 771,040 + DORF6830 0.60 -0.4 771,077 + DORF6830 0.66 -1.2 771,077 + DORF6830 0.66 -2.6 771,087 - DORF6830 0.67 -1.1 771,187 + DORF6830 0.83 -1.1 771,195 - DORF6830 0.84 -0.6 771,195 - DORF6830 0.84 -1.6 771,296 - +0.1 771,297 - -0.4 771,318 - +0.7 771,504 + -1.0 771,534 + -0.2 771,564 + +0.6
Or see this region's nucleotide sequence