Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0682 and DVU0683 are separated by 328 nucleotides DVU0683 and hflK are separated by 1 nucleotides
DVU0682: DVU0682 - DNA-binding protein, putative (TIGR), at 756,252 to 756,950
DVU0682
DVU0683: DVU0683 - hflC protein, putative (TIGR), at 757,279 to 758,130
DVU0683
DVU0684: hflK - hflK protein, putative (TIGR), at 758,132 to 759,238
hflK
Position (kb) 757
758
759 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 756.313 kb on + strand at 756.331 kb on - strand, within DVU0682 at 756.411 kb on - strand, within DVU0682 at 756.520 kb on + strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.645 kb on + strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.746 kb on - strand, within DVU0682 at 756.750 kb on + strand, within DVU0682 at 756.826 kb on + strand, within DVU0682 at 756.828 kb on - strand, within DVU0682 at 756.893 kb on + strand at 756.903 kb on - strand at 756.991 kb on - strand at 756.991 kb on - strand at 757.009 kb on - strand at 757.359 kb on + strand at 757.359 kb on + strand at 757.408 kb on - strand, within DVU0683 at 757.408 kb on - strand, within DVU0683 at 757.417 kb on + strand, within DVU0683 at 757.427 kb on + strand, within DVU0683 at 757.433 kb on + strand, within DVU0683 at 757.441 kb on - strand, within DVU0683 at 757.484 kb on + strand, within DVU0683 at 757.623 kb on - strand, within DVU0683 at 757.674 kb on + strand, within DVU0683 at 757.682 kb on - strand, within DVU0683 at 757.772 kb on + strand, within DVU0683 at 757.790 kb on + strand, within DVU0683 at 757.795 kb on + strand, within DVU0683 at 757.821 kb on - strand, within DVU0683 at 757.885 kb on - strand, within DVU0683 at 757.897 kb on + strand, within DVU0683 at 757.905 kb on - strand, within DVU0683 at 758.036 kb on - strand, within DVU0683 at 758.057 kb on - strand at 758.099 kb on + strand at 758.107 kb on - strand at 758.133 kb on - strand at 758.161 kb on - strand at 758.200 kb on - strand at 758.272 kb on + strand, within hflK at 758.305 kb on - strand, within hflK at 758.324 kb on - strand, within hflK at 758.456 kb on - strand, within hflK at 758.500 kb on - strand, within hflK at 758.529 kb on - strand, within hflK at 758.574 kb on - strand, within hflK at 758.600 kb on - strand, within hflK at 758.647 kb on - strand, within hflK at 758.700 kb on - strand, within hflK at 758.719 kb on + strand, within hflK at 758.774 kb on + strand, within hflK at 758.802 kb on - strand, within hflK at 758.864 kb on - strand, within hflK at 758.927 kb on - strand, within hflK at 758.950 kb on - strand, within hflK at 759.052 kb on + strand, within hflK
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 756,313 + +0.1 756,331 - DVU0682 0.11 +0.3 756,411 - DVU0682 0.23 -1.9 756,520 + DVU0682 0.38 -0.8 756,621 - DVU0682 0.53 +0.1 756,621 - DVU0682 0.53 -0.2 756,645 + DVU0682 0.56 -0.9 756,724 - DVU0682 0.68 -0.0 756,724 - DVU0682 0.68 -0.2 756,724 - DVU0682 0.68 -0.3 756,746 - DVU0682 0.71 +0.4 756,750 + DVU0682 0.71 +0.5 756,826 + DVU0682 0.82 -0.3 756,828 - DVU0682 0.82 +0.0 756,893 + +0.3 756,903 - +0.9 756,991 - -1.6 756,991 - +0.1 757,009 - -2.6 757,359 + -0.2 757,359 + +1.1 757,408 - DVU0683 0.15 +0.7 757,408 - DVU0683 0.15 -1.5 757,417 + DVU0683 0.16 -0.2 757,427 + DVU0683 0.17 -3.0 757,433 + DVU0683 0.18 -0.7 757,441 - DVU0683 0.19 -0.9 757,484 + DVU0683 0.24 -1.2 757,623 - DVU0683 0.40 -0.6 757,674 + DVU0683 0.46 -0.3 757,682 - DVU0683 0.47 -0.9 757,772 + DVU0683 0.58 -0.2 757,790 + DVU0683 0.60 +3.3 757,795 + DVU0683 0.61 -1.2 757,821 - DVU0683 0.64 -0.7 757,885 - DVU0683 0.71 -1.0 757,897 + DVU0683 0.73 -0.7 757,905 - DVU0683 0.73 +0.7 758,036 - DVU0683 0.89 -0.6 758,057 - -0.1 758,099 + +0.7 758,107 - -0.9 758,133 - -0.3 758,161 - -0.3 758,200 - -1.1 758,272 + hflK DVU0684 0.13 -0.3 758,305 - hflK DVU0684 0.16 -1.3 758,324 - hflK DVU0684 0.17 -0.9 758,456 - hflK DVU0684 0.29 -0.4 758,500 - hflK DVU0684 0.33 -0.4 758,529 - hflK DVU0684 0.36 -0.1 758,574 - hflK DVU0684 0.40 -1.7 758,600 - hflK DVU0684 0.42 +0.2 758,647 - hflK DVU0684 0.47 -0.7 758,700 - hflK DVU0684 0.51 -0.6 758,719 + hflK DVU0684 0.53 -1.5 758,774 + hflK DVU0684 0.58 -1.0 758,802 - hflK DVU0684 0.61 -0.7 758,864 - hflK DVU0684 0.66 -0.5 758,927 - hflK DVU0684 0.72 -0.7 758,950 - hflK DVU0684 0.74 -0.3 759,052 + hflK DVU0684 0.83 -0.5
Or see this region's nucleotide sequence