Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3033

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
3,156,528	-		DVU3031	0.79	-0.4
3,156,542	+		DVU3031	0.80	-1.0
3,156,607	-		DVU3031	0.86	-0.2
3,156,648	-				-1.3
3,156,656	+				-1.3
3,156,761	+				+0.3
3,156,792	+				-1.3
3,156,832	-		DVU3032	0.13	-0.3
3,156,863	-		DVU3032	0.18	-0.4
3,157,002	+		DVU3032	0.40	-0.8
3,157,049	+		DVU3032	0.47	+1.4
3,157,143	+		DVU3032	0.62	-0.6
3,157,235	-		DVU3032	0.77	-0.1
3,157,288	-		DVU3032	0.85	+0.5
3,157,342	-				-1.3
3,157,383	-				-2.3
3,157,383	-				-0.6
3,157,383	-				+0.5
3,157,401	-				-1.6
3,157,597	+				-0.1
3,157,597	+				+0.3
3,157,597	+				-0.5
3,157,597	+				+0.0
3,157,597	+				-0.3
3,157,605	-		DVU3033	0.10	-1.2
3,157,605	-		DVU3033	0.10	+0.3
3,157,623	+		DVU3033	0.11	-1.0
3,157,631	-		DVU3033	0.11	-0.9
3,157,763	-		DVU3033	0.18	-0.6
3,157,885	+		DVU3033	0.23	-0.5
3,157,964	+		DVU3033	0.27	-0.8
3,158,069	+		DVU3033	0.32	+0.5
3,158,110	+		DVU3033	0.34	-0.7
3,158,218	+		DVU3033	0.39	-0.3
3,158,312	+		DVU3033	0.43	-0.4
3,158,312	+		DVU3033	0.43	-0.2
3,158,400	-		DVU3033	0.47	+0.6
3,158,470	-		DVU3033	0.50	-1.3
3,158,505	-		DVU3033	0.52	-0.7
3,158,569	-		DVU3033	0.55	-1.3
3,158,796	+		DVU3033	0.66	-1.1
3,158,826	-		DVU3033	0.67	-1.6
3,158,847	+		DVU3033	0.68	-0.4
3,158,857	+		DVU3033	0.68	+0.2
3,158,860	-		DVU3033	0.68	-0.6
3,158,865	-		DVU3033	0.69	-1.0
3,158,865	-		DVU3033	0.69	-1.2
3,158,915	+		DVU3033	0.71	-0.5
3,158,923	-		DVU3033	0.71	-0.2
3,158,925	+		DVU3033	0.71	-0.3
3,158,952	-		DVU3033	0.73	-0.8
3,158,996	+		DVU3033	0.75	+1.9
3,159,024	+		DVU3033	0.76	+1.0
3,159,031	+		DVU3033	0.76	-0.7
3,159,055	+		DVU3033	0.78	-0.2
3,159,069	+		DVU3033	0.78	-1.3
3,159,069	+		DVU3033	0.78	-0.9
3,159,069	+		DVU3033	0.78	-0.6
3,159,069	+		DVU3033	0.78	-0.8
3,159,077	-		DVU3033	0.79	-1.3
3,159,087	-		DVU3033	0.79	+1.6
3,159,087	-		DVU3033	0.79	-0.8
3,159,238	-		DVU3033	0.86	+1.6
3,159,441	-				-0.3
3,159,490	+				-0.5
3,159,551	-				-0.8
3,159,637	+				-1.2
3,159,664	+				+0.0
3,159,672	-				+0.1
3,159,682	-				-0.6
3,159,686	+				-1.1
3,159,691	+				-0.0
3,159,868	+				-0.0
3,159,977	-		DVU3035	0.14	+0.7
3,160,014	+		DVU3035	0.16	-0.3
3,160,037	-		DVU3035	0.17	-0.0
3,160,081	+		DVU3035	0.19	-0.7
3,160,128	-		DVU3035	0.22	+0.2
3,160,161	+		DVU3035	0.24	+0.2
3,160,220	-		DVU3035	0.27	-1.1
3,160,373	+		DVU3035	0.35	+1.6
3,160,461	-		DVU3035	0.40	-0.1
3,160,508	-		DVU3035	0.43	-1.4
3,160,531	+		DVU3035	0.44	-0.1
3,160,531	+		DVU3035	0.44	+0.0