Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2852 and DVU2853 are separated by 1 nucleotides DVU2853 and DVU2854 are separated by 1 nucleotides DVU2854 and DVU2855 are separated by 122 nucleotides
DVU2852: DVU2852 - tail protein, putative (TIGR), at 2,952,844 to 2,953,320
DVU2852
DVU2853: DVU2853 - phage baseplate assembly protein V, putative (TIGR), at 2,953,322 to 2,953,960
DVU2853
DVU2854: DVU2854 - tail protein, putative (TIGR), at 2,953,962 to 2,955,095
DVU2854
DVU2855: DVU2855 - tail/DNA circulation protein, putative (TIGR), at 2,955,218 to 2,956,417
DVU2855
Position (kb)
2953
2954
2955
2956 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2952.972 kb on + strand, within DVU2852 at 2952.972 kb on + strand, within DVU2852 at 2952.980 kb on - strand, within DVU2852 at 2953.222 kb on + strand, within DVU2852 at 2953.270 kb on - strand, within DVU2852 at 2953.499 kb on - strand, within DVU2853 at 2953.505 kb on + strand, within DVU2853 at 2953.646 kb on + strand, within DVU2853 at 2953.655 kb on - strand, within DVU2853 at 2953.655 kb on - strand, within DVU2853 at 2954.583 kb on + strand, within DVU2854 at 2954.591 kb on - strand, within DVU2854 at 2954.598 kb on - strand, within DVU2854 at 2954.626 kb on - strand, within DVU2854 at 2954.718 kb on + strand, within DVU2854 at 2954.780 kb on - strand, within DVU2854 at 2954.780 kb on - strand, within DVU2854 at 2954.785 kb on - strand, within DVU2854 at 2955.227 kb on + strand at 2955.284 kb on - strand at 2955.348 kb on - strand, within DVU2855 at 2955.484 kb on - strand, within DVU2855 at 2955.633 kb on + strand, within DVU2855 at 2955.656 kb on - strand, within DVU2855 at 2955.979 kb on + strand, within DVU2855
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.025 mg/mL remove 2,952,972 + DVU2852 0.27 -0.6 2,952,972 + DVU2852 0.27 -1.4 2,952,980 - DVU2852 0.29 -0.3 2,953,222 + DVU2852 0.79 -0.8 2,953,270 - DVU2852 0.89 +0.5 2,953,499 - DVU2853 0.28 -0.2 2,953,505 + DVU2853 0.29 -0.2 2,953,646 + DVU2853 0.51 -0.5 2,953,655 - DVU2853 0.52 -0.6 2,953,655 - DVU2853 0.52 -0.3 2,954,583 + DVU2854 0.55 -0.3 2,954,591 - DVU2854 0.55 -0.3 2,954,598 - DVU2854 0.56 +0.5 2,954,626 - DVU2854 0.59 -1.1 2,954,718 + DVU2854 0.67 -0.3 2,954,780 - DVU2854 0.72 -0.9 2,954,780 - DVU2854 0.72 -2.8 2,954,785 - DVU2854 0.73 -1.4 2,955,227 + +0.1 2,955,284 - -0.0 2,955,348 - DVU2855 0.11 +0.5 2,955,484 - DVU2855 0.22 -1.2 2,955,633 + DVU2855 0.35 -0.6 2,955,656 - DVU2855 0.36 -0.0 2,955,979 + DVU2855 0.63 -0.6
Or see this region's nucleotide sequence