Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2449

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
2,552,207	+				+0.1
2,552,215	-				-0.2
2,552,222	-				-0.2
2,552,222	-				+0.1
2,552,241	-				-0.1
2,552,243	-				-0.3
2,552,243	-				-0.6
2,552,243	-				+0.2
2,552,253	-				-1.1
2,552,408	+	panC	DVU2448	0.12	-0.6
2,552,416	-	panC	DVU2448	0.13	-0.8
2,552,416	-	panC	DVU2448	0.13	+0.6
2,552,416	-	panC	DVU2448	0.13	-0.9
2,552,416	-	panC	DVU2448	0.13	-1.7
2,552,431	+	panC	DVU2448	0.15	+0.0
2,552,434	-	panC	DVU2448	0.15	+0.6
2,552,596	+	panC	DVU2448	0.34	-0.0
2,552,669	+	panC	DVU2448	0.43	-0.1
2,552,674	+	panC	DVU2448	0.44	-0.8
2,552,674	+	panC	DVU2448	0.44	-0.6
2,552,682	-	panC	DVU2448	0.44	-0.1
2,552,682	-	panC	DVU2448	0.44	-1.0
2,552,682	-	panC	DVU2448	0.44	-0.2
2,552,683	+	panC	DVU2448	0.45	+0.6
2,552,691	-	panC	DVU2448	0.46	-1.2
2,552,691	-	panC	DVU2448	0.46	-0.4
2,552,865	+	panC	DVU2448	0.66	-0.6
2,552,873	-	panC	DVU2448	0.67	-1.2
2,552,874	-	panC	DVU2448	0.67	+0.4
2,552,942	-	panC	DVU2448	0.75	+0.6
2,552,952	-	panC	DVU2448	0.76	-0.2
2,553,025	-	panC	DVU2448	0.85	-0.1
2,553,039	-	panC	DVU2448	0.86	-0.5
2,553,051	+	panC	DVU2448	0.88	-1.9
2,553,051	+	panC	DVU2448	0.88	-0.0
2,553,078	+				+0.4
2,554,548	+				-0.7
2,554,549	-				-0.7
2,554,872	-				-0.1
2,554,877	+				+0.0
2,554,900	+				-0.9
2,555,183	-				-1.0
2,555,223	+				-1.3
2,555,236	+		DVU2451	0.11	+0.1
2,555,376	-		DVU2451	0.19	+0.5