Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2136

Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with Spectinomycin 0.025 mg/mL
2,231,007	+				-0.5
2,231,032	+				-0.2
2,231,032	+				-0.2
2,231,064	-				-2.7
2,231,072	-				-1.5
2,231,194	-				-1.8
2,231,243	+				-0.5
2,231,324	+				-0.7
2,231,383	-				+0.2
2,231,437	+		DVU2135	0.18	-0.0
2,231,444	+		DVU2135	0.19	-1.2
2,231,444	+		DVU2135	0.19	+0.5
2,231,452	-		DVU2135	0.20	+0.0
2,231,556	+		DVU2135	0.39	-0.8
2,231,583	-		DVU2135	0.44	-0.1
2,231,599	-		DVU2135	0.47	-0.2
2,231,605	-		DVU2135	0.48	-0.5
2,231,736	+		DVU2135	0.72	-0.1
2,231,736	+		DVU2135	0.72	-1.5
2,231,871	-				+0.1
2,231,890	+				+0.7
2,231,923	+				-1.1
2,231,947	+				-0.2
2,232,057	+				+0.7
2,232,064	+				-1.7
2,232,133	-		DVU2136	0.14	-0.6
2,232,181	-		DVU2136	0.18	+0.5
2,232,245	+		DVU2136	0.23	-0.2
2,232,411	+		DVU2136	0.37	-0.4
2,232,411	+		DVU2136	0.37	-1.3
2,232,419	-		DVU2136	0.38	-0.0
2,232,446	-		DVU2136	0.40	-0.3
2,232,564	+		DVU2136	0.50	-1.1
2,232,572	-		DVU2136	0.51	-0.5
2,232,572	-		DVU2136	0.51	+0.5
2,232,572	-		DVU2136	0.51	-0.3
2,232,579	+		DVU2136	0.52	-0.7
2,232,587	-		DVU2136	0.52	-0.2
2,232,642	+		DVU2136	0.57	-0.5
2,232,650	+		DVU2136	0.58	-0.7
2,232,668	-		DVU2136	0.59	-0.2
2,232,730	-		DVU2136	0.64	-0.1
2,232,744	-		DVU2136	0.66	-0.9
2,232,746	+		DVU2136	0.66	-0.8
2,232,770	+		DVU2136	0.68	-0.4
2,232,841	-		DVU2136	0.74	+0.1
2,232,866	+		DVU2136	0.76	-1.0
2,232,881	-		DVU2136	0.77	-1.2
2,232,889	+		DVU2136	0.78	-0.0
2,232,895	-		DVU2136	0.78	-1.2
2,232,897	-		DVU2136	0.79	+0.4
2,232,929	+		DVU2136	0.81	-0.2
2,232,935	+		DVU2136	0.82	-0.3
2,233,035	+				-0.4
2,233,053	-				-0.3
2,233,092	-				-0.9
2,233,118	+				+0.1
2,233,222	+				+0.1
2,233,237	-				+0.1
2,233,327	+				+1.5
2,233,382	-				-0.2
2,233,502	+				-0.3
2,233,510	-				+0.1
2,233,663	+	sucCD	DVU2137	0.14	-2.9
2,233,739	-	sucCD	DVU2137	0.17	+0.3
2,233,935	+	sucCD	DVU2137	0.26	-1.1
2,233,936	-	sucCD	DVU2137	0.27	+1.0
2,233,954	+	sucCD	DVU2137	0.27	+1.5
2,234,087	-	sucCD	DVU2137	0.34	-0.2
2,234,087	-	sucCD	DVU2137	0.34	+0.5
2,234,113	+	sucCD	DVU2137	0.35	-0.1
2,234,121	-	sucCD	DVU2137	0.35	-0.8