Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF46408
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,364,996 | + | -0.6 | |||
| 3,365,125 | + | -1.1 | |||
| 3,365,170 | + | -1.1 | |||
| 3,365,204 | - | DVU3202 | 0.11 | -0.2 | |
| 3,365,302 | + | DVU3202 | 0.23 | -0.6 | |
| 3,365,354 | + | DVU3202 | 0.29 | -0.6 | |
| 3,365,406 | + | DVU3202 | 0.35 | +0.1 | |
| 3,365,414 | - | DVU3202 | 0.36 | -1.4 | |
| 3,365,541 | + | DVU3202 | 0.51 | -1.6 | |
| 3,365,549 | - | DVU3202 | 0.52 | -1.7 | |
| 3,365,585 | + | DVU3202 | 0.57 | -0.9 | |
| 3,365,586 | - | DVU3202 | 0.57 | +0.8 | |
| 3,365,702 | + | DVU3202 | 0.70 | -0.9 | |
| 3,365,705 | - | DVU3202 | 0.71 | -0.3 | |
| 3,365,726 | + | DVU3202 | 0.73 | -1.4 | |
| 3,365,734 | - | DVU3202 | 0.74 | +0.0 | |
| 3,365,734 | - | DVU3202 | 0.74 | -0.2 | |
| 3,365,779 | + | DVU3202 | 0.80 | -0.4 | |
| 3,365,867 | + | -0.9 | |||
| 3,365,868 | + | -1.5 | |||
| 3,365,885 | + | -1.2 | |||
| 3,365,885 | + | -1.6 | |||
| 3,365,886 | - | -0.8 | |||
| 3,365,956 | - | -0.2 | |||
| 3,365,958 | + | -0.6 | |||
| 3,365,977 | - | DORF46408 | 0.23 | +0.1 | |
| 3,365,998 | + | DORF46408 | 0.38 | +0.7 | |
| 3,365,999 | - | DORF46408 | 0.39 | -0.7 | |
| 3,366,063 | - | DORF46408 | 0.86 | +0.7 | |
| 3,366,282 | + | -0.6 |
Or see this region's nucleotide sequence