Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DORF37657
Experiment: MoYLS4 with Spectinomycin 0.025 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Spectinomycin 0.025 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,895,902 | - | DVU1830 | 0.18 | -0.3 | |
1,895,935 | + | DVU1830 | 0.22 | -0.7 | |
1,896,019 | + | DVU1830 | 0.29 | +0.9 | |
1,896,115 | + | DVU1830 | 0.38 | +0.2 | |
1,896,123 | - | DVU1830 | 0.39 | -2.3 | |
1,896,123 | - | DVU1830 | 0.39 | -0.6 | |
1,896,158 | + | DVU1830 | 0.42 | -0.3 | |
1,896,385 | - | DVU1830 | 0.64 | +0.1 | |
1,896,532 | + | DVU1830 | 0.78 | +0.5 | |
1,896,535 | - | DVU1830 | 0.78 | -0.5 | |
1,896,611 | + | DVU1830 | 0.85 | -1.2 | |
1,896,716 | - | -0.9 | |||
1,896,834 | + | -0.1 | |||
1,896,842 | - | -0.4 | |||
1,896,895 | + | +0.6 | |||
1,897,074 | - | DORF37657 | 0.54 | -0.8 | |
1,897,131 | - | -0.1 | |||
1,897,197 | + | -0.2 | |||
1,897,367 | - | DORF37658 | 0.45 | -0.1 | |
1,897,401 | - | DORF37658 | 0.51 | -0.1 | |
1,897,478 | + | DORF37658 | 0.64 | -0.0 | |
1,897,552 | + | DORF37658 | 0.76 | -0.2 | |
1,897,607 | - | DORF37658 | 0.86 | -0.8 | |
1,897,719 | + | -0.7 | |||
1,897,883 | + | +1.4 | |||
1,897,901 | - | -0.5 | |||
1,898,233 | - | -0.4 |
Or see this region's nucleotide sequence