Experiment: MoYLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1213 and DVU1214 are separated by 385 nucleotides DVU1214 and DVU1215 are separated by 14 nucleotides
DVU1213: DVU1213 - rhomboid family protein (TIGR), at 1,302,307 to 1,303,320
DVU1213
DVU1214: DVU1214 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (TIGR), at 1,303,706 to 1,305,880
DVU1214
DVU1215: DVU1215 - PAP2 family protein (TIGR), at 1,305,895 to 1,306,509
DVU1215
Position (kb)
1303
1304
1305
1306 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1302.782 kb on - strand, within DVU1213 at 1302.796 kb on + strand, within DVU1213 at 1302.963 kb on - strand, within DVU1213 at 1303.009 kb on + strand, within DVU1213 at 1303.014 kb on + strand, within DVU1213 at 1303.014 kb on - strand, within DVU1213 at 1303.116 kb on + strand, within DVU1213 at 1303.116 kb on + strand, within DVU1213 at 1303.116 kb on + strand, within DVU1213 at 1303.186 kb on + strand, within DVU1213 at 1303.252 kb on + strand at 1303.268 kb on + strand at 1303.365 kb on - strand at 1303.395 kb on + strand at 1303.403 kb on - strand at 1303.452 kb on - strand at 1303.497 kb on + strand at 1303.503 kb on - strand at 1303.620 kb on + strand at 1303.803 kb on - strand at 1303.829 kb on - strand at 1303.840 kb on - strand at 1303.951 kb on + strand, within DVU1214 at 1303.985 kb on + strand, within DVU1214 at 1304.163 kb on + strand, within DVU1214 at 1304.220 kb on - strand, within DVU1214 at 1304.439 kb on - strand, within DVU1214 at 1304.481 kb on + strand, within DVU1214 at 1304.580 kb on - strand, within DVU1214 at 1304.630 kb on + strand, within DVU1214 at 1304.739 kb on + strand, within DVU1214 at 1304.757 kb on + strand, within DVU1214 at 1304.767 kb on + strand, within DVU1214 at 1304.827 kb on + strand, within DVU1214 at 1304.830 kb on - strand, within DVU1214 at 1305.109 kb on - strand, within DVU1214 at 1305.123 kb on + strand, within DVU1214 at 1305.166 kb on - strand, within DVU1214 at 1305.258 kb on - strand, within DVU1214 at 1305.280 kb on + strand, within DVU1214 at 1305.357 kb on + strand, within DVU1214 at 1305.359 kb on - strand, within DVU1214 at 1305.478 kb on - strand, within DVU1214 at 1305.961 kb on + strand, within DVU1215 at 1306.048 kb on + strand, within DVU1215 at 1306.056 kb on - strand, within DVU1215 at 1306.056 kb on - strand, within DVU1215 at 1306.083 kb on - strand, within DVU1215 at 1306.088 kb on + strand, within DVU1215 at 1306.102 kb on + strand, within DVU1215 at 1306.439 kb on - strand, within DVU1215 at 1306.567 kb on + strand at 1306.676 kb on + strand at 1306.711 kb on + strand at 1306.779 kb on - strand at 1306.803 kb on + strand at 1306.813 kb on + strand at 1306.813 kb on + strand at 1306.813 kb on + strand at 1306.816 kb on - strand at 1306.816 kb on - strand at 1306.816 kb on - strand at 1306.816 kb on - strand at 1306.821 kb on - strand at 1306.821 kb on - strand at 1306.821 kb on - strand at 1306.821 kb on - strand at 1306.821 kb on - strand at 1306.861 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorate 6.25 mM remove 1,302,782 - DVU1213 0.47 +0.2 1,302,796 + DVU1213 0.48 +0.2 1,302,963 - DVU1213 0.65 +0.4 1,303,009 + DVU1213 0.69 -2.2 1,303,014 + DVU1213 0.70 -0.0 1,303,014 - DVU1213 0.70 -0.4 1,303,116 + DVU1213 0.80 -0.2 1,303,116 + DVU1213 0.80 +0.3 1,303,116 + DVU1213 0.80 -0.3 1,303,186 + DVU1213 0.87 -0.0 1,303,252 + -0.5 1,303,268 + +0.0 1,303,365 - +0.0 1,303,395 + -0.7 1,303,403 - -0.1 1,303,452 - -0.7 1,303,497 + +0.2 1,303,503 - -0.1 1,303,620 + -0.2 1,303,803 - +0.3 1,303,829 - -0.2 1,303,840 - -0.3 1,303,951 + DVU1214 0.11 +0.1 1,303,985 + DVU1214 0.13 +0.1 1,304,163 + DVU1214 0.21 -1.0 1,304,220 - DVU1214 0.24 -0.5 1,304,439 - DVU1214 0.34 -3.7 1,304,481 + DVU1214 0.36 -3.1 1,304,580 - DVU1214 0.40 -3.2 1,304,630 + DVU1214 0.42 -1.2 1,304,739 + DVU1214 0.47 -3.7 1,304,757 + DVU1214 0.48 -3.1 1,304,767 + DVU1214 0.49 -4.0 1,304,827 + DVU1214 0.52 -2.9 1,304,830 - DVU1214 0.52 -3.0 1,305,109 - DVU1214 0.65 -4.3 1,305,123 + DVU1214 0.65 -3.8 1,305,166 - DVU1214 0.67 -0.5 1,305,258 - DVU1214 0.71 -2.9 1,305,280 + DVU1214 0.72 -0.6 1,305,357 + DVU1214 0.76 -4.4 1,305,359 - DVU1214 0.76 -2.9 1,305,478 - DVU1214 0.81 -3.9 1,305,961 + DVU1215 0.11 -0.0 1,306,048 + DVU1215 0.25 -1.2 1,306,056 - DVU1215 0.26 -1.1 1,306,056 - DVU1215 0.26 -0.7 1,306,083 - DVU1215 0.31 -1.0 1,306,088 + DVU1215 0.31 -1.6 1,306,102 + DVU1215 0.34 -1.0 1,306,439 - DVU1215 0.88 -0.7 1,306,567 + +0.9 1,306,676 + -1.8 1,306,711 + -0.1 1,306,779 - +0.1 1,306,803 + -0.2 1,306,813 + -0.3 1,306,813 + +0.7 1,306,813 + +0.6 1,306,816 - -0.3 1,306,816 - -0.7 1,306,816 - -0.0 1,306,816 - -0.4 1,306,821 - +1.0 1,306,821 - -0.8 1,306,821 - -0.3 1,306,821 - -0.8 1,306,821 - +0.2 1,306,861 + -0.2
Or see this region's nucleotide sequence